RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 USF1P22415 310 aaPredicted RBP12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 SSBP2P81877 361 aaPredicted RBP12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 RBPJQ06330 500 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 PSG5Q15238 335 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 PDPNQ86YL7 162 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 C8orf31Q8N9H6 132 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 TMEM37Q8WXS4 190 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF430Q9H8G1 570 aaPredicted RBP12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 PITPNC1Q9UKF7 332 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 K7EN84 100 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 TYMSP04818 313 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 IL3RAP26951 378 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 ATP5IP56385 69 aaPredicted RBP12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 HIST1H2BLQ99880 126 aa12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 FNDC4Q9H6D8 234 aaPredicted RBP12.39□□□□□ -0.43
CACNA1E-208ENST00000533229 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 IGHV3-48P01763 117 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF137PP52743 207 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 ACTL10Q5JWF8 245 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 FAM71F2Q6NXP2 309 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 TGIF2LXQ8IUE1 241 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 WASHC3Q9Y3C0 194 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 ZZEF1O43149 2961 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 INS-IGF2F8WCM5 200 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 SIAH2O43255 324 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 CD3EP07766 207 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 ERHP84090 104 aaKnown RBP12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 KCNIP4Q6PIL6 250 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 SGMS2Q8NHU3 365 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 C11orf52Q96A22 123 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 ACY3Q96HD9 319 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 PACRGQ96M98 296 aaPredicted RBP12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 PRO1933Q9H354 126 aa12.38□□□□□ -0.43
CACNA1E-208ENST00000533229 B9A039 149 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 SLC25A17O43808 307 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 MT-CO2P00403 227 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 OR10J4P0C629 311 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 DEFA6Q01524 100 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 TMEM183AQ8IXX5 376 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 C14orf144Q96I85 54 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 PSMB11A5LHX3 300 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 OR5G3P0C626 314 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 LCN2P80188 198 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 FOXL1Q12952 345 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 OR4A5Q8NH83 315 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 CACNG8Q8WXS5 425 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 MRPL36Q9P0J6 103 aaKnown RBP12.37□□□□□ -0.43
CACNA1E-208ENST00000533229 POLEQ07864 2286 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 TRAV5A0A0B4J249 113 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 A0A0U1RQK1 487 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 MDFIC2A0A1B0GVS7 189 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF320A2RRD8 509 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 FAM90A27PA6NNH2 459 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 OR7C2O60412 319 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 AREGP15514 252 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 CRYBB3P26998 211 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 RPL15P61313 204 aaKnown RBP12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 CDSNQ15517 529 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 RUSC1-AS1Q66K80 236 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF600Q6ZNG1 722 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 OR1P1Q8NH06 330 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 TECRQ9NZ01 308 aaKnown RBP12.36□□□□□ -0.43
CACNA1E-208ENST00000533229 A0A1W2PN81 502 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 REG1AP05451 166 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 PPOXP50336 477 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 PNKDQ8N490 385 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 A0A1W2PPI3 338 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 SLC17A3O00476 420 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 ENSAO43768 121 aaKnown RBP12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 CNTFRP26992 372 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 ZNF90Q03938 601 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 EAF1Q96JC9 268 aaPredicted RBP12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 LRBAP50851 2863 aa12.35□□□□□ -0.43
CACNA1E-208ENST00000533229 SPTA1P02549 2419 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 IGKV1D-37A0A075B6S9 117 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 OR5I1Q13606 314 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 MUC15Q8N387 334 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 FAM167A-AS1Q96KT0 104 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 RALYQ9UKM9 306 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms