RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 CTDSP2O14595 271 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 CTDSPLO15194 276 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 MT-CO2P00403 227 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 UCP1P25874 307 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 SURF2Q15527 256 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-209ENST00000533196 SCGB2B2Q4G0G5 96 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 ZFAND6Q6FIF0 208 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 OR13C8Q8NGS7 320 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 SMIM4Q8WVI0 70 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 PDCD10Q9BUL8 212 aa17.51■□□□□ 0.39
SMPD1-209ENST00000533196 CCDC59Q9P031 241 aaKnown RBP17.51■□□□□ 0.39
SMPD1-209ENST00000533196 RYR2Q92736 4967 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 TMBIM6P55061 237 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 TRIM16LQ309B1 348 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 CLVS1Q8IUQ0 354 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-209ENST00000533196 SLC35G3Q8N808 338 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 OR10C1Q96KK4 312 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 FAM110AQ9BQ89 295 aa17.5■□□□□ 0.39
SMPD1-209ENST00000533196 NXF2Q9GZY0 626 aaKnown RBP17.5■□□□□ 0.39
SMPD1-209ENST00000533196 A0A0B4J293 547 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 OR4C46A6NHA9 309 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 DISC1C4P0D8 188 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 CORTO00230 105 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 SNCAP37840 140 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 SUB1P53999 127 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMPD1-209ENST00000533196 MARCH1Q8TCQ1 289 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 RRNAD1Q96FB5 475 aaKnown RBP17.49■□□□□ 0.39
SMPD1-209ENST00000533196 SMPXQ9UHP9 88 aa17.49■□□□□ 0.39
SMPD1-209ENST00000533196 C14orf166Q9Y224 244 aaKnown RBP17.49■□□□□ 0.39
SMPD1-209ENST00000533196 ST8SIA3O43173 380 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 GNG7O60262 68 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 IFNA17P01571 189 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 NPBWR1P48145 328 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 IZUMO4Q1ZYL8 232 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 PVRIGQ6DKI7 326 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 FAM219AQ8IW50 185 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 DYNC2LI1Q8TCX1 351 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 PINX1Q96BK5 328 aaKnown RBP17.48■□□□□ 0.39
SMPD1-209ENST00000533196 DIRAS2Q96HU8 199 aa17.48■□□□□ 0.39
SMPD1-209ENST00000533196 IGHV7-4-1A0A0J9YVY3 117 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 AKAIN1P0CW23 69 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 IL18Q14116 193 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 DUSP18Q8NEJ0 188 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 ZNF414Q96IQ9 312 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 TMEM222Q9H0R3 208 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 TENM2Q9NT68 2774 aa17.47■□□□□ 0.39
SMPD1-209ENST00000533196 LCE6AA0A183 80 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 CDS2O95674 445 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 SP6Q3SY56 376 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 TMEM116Q8NCL8 245 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 RNASE11Q8TAA1 199 aaKnown RBP17.46■□□□□ 0.39
SMPD1-209ENST00000533196 ENY2Q9NPA8 101 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 CSMD3Q7Z407 3707 aa17.46■□□□□ 0.39
SMPD1-209ENST00000533196 IGHV3OR16-8A0A075B7F1 116 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 TRAV14DV4A0A0A6YYC5 116 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 CHEK1O14757 476 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 ZNF207O43670 478 aaKnown RBP17.45■□□□□ 0.38
SMPD1-209ENST00000533196 YIF1AO95070 293 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 CD5P06127 495 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 APOC4P55056 127 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 CMC4P56277 68 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-209ENST00000533196 DHODHQ02127 395 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 AARDQ4LEZ3 155 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 SPINK9Q5DT21 86 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 PRRT1Q99946 306 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 GINS3Q9BRX5 216 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 RTBDNQ9BSG5 229 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-209ENST00000533196 RHPN1-AS1Q9BWJ2 59 aa17.45■□□□□ 0.38
SMPD1-209ENST00000533196 NOL3O60936 208 aaKnown RBP17.44■□□□□ 0.38
SMPD1-209ENST00000533196 BMI1P35226 326 aa17.44■□□□□ 0.38
SMPD1-209ENST00000533196 RPL5P46777 297 aaKnown RBP17.44■□□□□ 0.38
SMPD1-209ENST00000533196 HOXA1P49639 335 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-209ENST00000533196 OR52E5Q8NH55 327 aa17.44■□□□□ 0.38
SMPD1-209ENST00000533196 NAA60Q9H7X0 242 aa17.44■□□□□ 0.38
SMPD1-209ENST00000533196 RSL24D1Q9UHA3 163 aaKnown RBP17.44■□□□□ 0.38
SMPD1-209ENST00000533196 GPR132Q9UNW8 380 aa17.44■□□□□ 0.38
SMPD1-209ENST00000533196 TEX13DA0A0J9YY54 714 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-209ENST00000533196 UBE2CO00762 179 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 GSTZ1O43708 216 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-209ENST00000533196 OR5AC1P0C628 307 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 RNASE2P10153 161 aaKnown RBP17.43■□□□□ 0.38
SMPD1-209ENST00000533196 ETV6P41212 452 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 ODF3L2Q3SX64 289 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 FAAP20Q6NZ36 180 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 Q6ZWC4 215 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 OR4C16Q8NGL9 310 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 GLYATL2Q8WU03 294 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 RBPMSQ93062 196 aaKnown RBP17.43■□□□□ 0.38
SMPD1-209ENST00000533196 RNF2Q99496 336 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 OVOL2Q9BRP0 275 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-209ENST00000533196 UBQLN2Q9UHD9 624 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 TP53TG1Q9Y2A0 90 aa17.43■□□□□ 0.38
SMPD1-209ENST00000533196 KIR2DL5BA0A0G2JN68 375 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 KIR2DL5BA0A0G2JPC4 375 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 A0A0G2JRQ6 117 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 IGHV3-48P01763 117 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 SPCS3P61009 180 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 ZNF600Q6ZNG1 722 aa17.42■□□□□ 0.38
SMPD1-209ENST00000533196 KIR2DL5AQ8N109 375 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms