RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 FAM223AQ8IWN6 122 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 NECAP1Q8NC96 275 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR1L6Q8NGR2 347 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 MISP3Q96FF7 219 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 USMG5Q96IX5 58 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 RBKSQ9H477 322 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 THYN1Q9P016 225 aa9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
TRAPPC4-212ENST00000533058 ANKRD34BA5PLL1 514 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 GOSR2O14653 212 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 IAPPP10997 89 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 EXOSC2Q13868 293 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 AARDQ4LEZ3 155 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 GSG1LQ6UXU4 331 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 MAGT1Q9H0U3 335 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 HSPB7Q9UBY9 170 aa9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 PAIP2BQ9ULR5 123 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-212ENST00000533058 IGLV11-55A0A075B6I3 123 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 IGHV3-21A0A0B4J1V1 117 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 LINC01619G3V211 115 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 K7EIL1 84 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 PITX3O75364 302 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 NDUFB8O95169 186 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 IFNA10P01566 189 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 IGHV3-23P01764 117 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 ZBTB8BQ8NAP8 495 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR1P1Q8NH06 330 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 PINX1Q96BK5 328 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 OR10C1Q96KK4 312 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 FANCD2OSQ96PS1 177 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 ALG5Q9Y673 324 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 S4R3C0 116 aa9.97□□□□□ -0.81
TRAPPC4-212ENST00000533058 SEC14L6B5MCN3 397 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 SYNGR2O43760 224 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 HSPB1P04792 205 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 HTR2BP41595 481 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 C11orf87Q6NUJ2 197 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 CXorf58Q96LI9 332 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 C2orf50Q96LR7 162 aa9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 CIB3Q96Q77 187 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC4-212ENST00000533058 WI2-2373I1.2A0A1W2PRP0 233 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 INS-IGF2F8WCM5 200 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 OVOL1O14753 267 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 SSSCA1O60232 199 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 SIX6O95475 246 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 NPY1RP25929 384 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 MFAP2P55001 183 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 S100A10P60903 97 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 NOXA1Q86UR1 476 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 DCUN1D4Q92564 292 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 MGAT4CQ9UBM8 478 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 LSM5Q9Y4Y9 91 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
TRAPPC4-212ENST00000533058 IGHV4OR15-8A0A075B7B6 117 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 A0A087WW49 117 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 C7orf66A4D0T2 115 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 MFSD2BA6NFX1 497 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 CORTO00230 105 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 IFNA4P05014 189 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 OPRK1P41145 380 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 RPP30P78346 268 aaKnown RBP9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 OXA1LQ15070 435 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 ZNF343Q6P1L6 599 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 CLEC19AQ6UXS0 136 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 MED28Q9H204 178 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 RANGRFQ9HD47 186 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 PEF1Q9UBV8 284 aaKnown RBP9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 U3KQ87 197 aa9.94□□□□□ -0.82
TRAPPC4-212ENST00000533058 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 L7N2F9 121 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 MT-CO2P00403 227 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 MBPP02686 304 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 ZP3P21754 424 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 RAB11AP62491 216 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 VAMP2P63027 116 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 ID3Q02535 119 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 KLK9Q2XQG4 91 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 Q56UQ5 140 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 SPANXN5Q5MJ07 72 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 VN1R17PQ8TDU5 208 aa9.93□□□□□ -0.82
TRAPPC4-212ENST00000533058 C21orf62Q9NYP8 219 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms