RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	HLA-DMB	P28068	263 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CCR2	P41597	374 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CDKN2C	P42773	168 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	MAGEA12	P43365	314 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	RPL5	P46777	297 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CDK9	P50750	372 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	AP3S2	P59780	193 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	LSM6	P62312	80 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	RAN	P62826	216 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	HBA1	P69905	142 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	SLC38A11	Q08AI6	406 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	FADD	Q13158	208 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	SRSF6	Q13247	344 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	NNAT	Q16517	81 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768		Q1T7F1	81 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ARHGAP11B	Q3KRB8	267 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TMEM97	Q5BJF2	176 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	FAM27B	Q5VT28	67 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	AADACL3	Q5VUY0	350 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	C8orf74	Q6P047	294 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	UNQ6190/PRO20217	Q6UXQ8	127 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ZNF826P	Q6ZT77	177 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	SLC36A1	Q7Z2H8	476 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	OOSP2	Q86WS3	158 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	LRRC28	Q86X40	367 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	DHFR2	Q86XF0	187 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TRAPPC5	Q8IUR0	188 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ZNF676	Q8N7Q3	588 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ZNF565	Q8N9K5	539 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	C9orf163	Q8N9P6	203 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	OR8B3	Q8NGG8	313 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	OR4D11	Q8NGI4	311 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	PFN4	Q8NHR9	129 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ACOT12	Q8WYK0	555 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TOMM6	Q96B49	74 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ZNF625	Q96I27	306 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	C2orf50	Q96LR7	162 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CCDC42	Q96M95	316 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	PRAP1	Q96NZ9	151 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	SCGB3A1	Q96QR1	104 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CMSS1	Q9BQ75	279 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	DERL1	Q9BUN8	251 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	PARD6G	Q9BYG4	376 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TRIM4	Q9C037	500 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	YIPF3	Q9GZM5	350 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TLNRD1	Q9H1K6	362 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	DCSTAMP	Q9H295	470 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	OR51V1	Q9H2C8	321 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CST9L	Q9H4G1	147 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CISH	Q9NSE2	258 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	NHP2	Q9NX24	153 aa	Known RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	PAQR5	Q9NXK6	330 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	FBXL12	Q9NXK8	326 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CKLF	Q9UBR5	152 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	NAT8	Q9UHE5	227 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	SOX21	Q9Y651	276 aa	Predicted RBP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	LHFPL6	Q9Y693	200 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	RTL1	A6NKG5	1358 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TONSL	Q96HA7	1378 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	ROS1	P08922	2347 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	RGS12	O14924	1447 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	WRN	Q14191	1432 aa	Predicted RBP eCLIP	0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	CAMSAP1	Q5T5Y3	1602 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	TAF1L	Q8IZX4	1826 aa		0.27	□□□□□ -2.37
RSF1-210	ENST00000531768	MYLK	Q15746	1914 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	CHD3	Q12873	2000 aa	Known RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	HEATR1	Q9H583	2144 aa	Known RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TRAV9-1	A0A075B6T8	112 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768		A0A087WUJ7	227 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TGIF2-C20orf24	A0A0A6YYL0	155 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV1D-43	A0A0B4J1Z2	117 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV3D-7	A0A0C4DH55	119 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV3OR2-268	A0A0C4DH90	116 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768		A0A0D9SG52	128 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TRBV6-5	A0A0K0K1A5	114 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	EXOC1L	A0A1B0GW35	172 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV2-29	A2NJV5	120 aa	Predicted RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	OR4C46	A6NHA9	309 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TMEM210	A6NLX4	147 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IBA57-AS1	B1ANH7	110 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TMEM114	B3SHH9	223 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	FAAH	O00519	579 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	PIR	O00625	290 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	FADS1	O60427	444 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	OR2B3	O76000	313 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	ZNF682	O95780	498 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	IGKV2D-40	P01614	121 aa	Predicted RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TNNC2	P02585	160 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	PMP2	P02689	132 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	ANG	P03950	147 aa	Known RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	SHBG	P04278	402 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TCRB	P04435	133 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	RPS17	P08708	135 aa	Known RBP	0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	BAALC-AS2	P0C853	105 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	TRGC1	P0CF51	173 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	MIF	P14174	115 aa		0.26	□□□□□ -2.37
RSF1-210	ENST00000531768	PPIB	P23284	216 aa	Known RBP	0.26	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 341.6 ms