RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 C3orf85A0A1B0GTC6 90 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 TRDCB7Z8K6 153 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 DNASE2O00115 360 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 GPR31O00270 319 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 ST8SIA3O43173 380 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 SPINT2O43291 252 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 HSPA12AO43301 675 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 MBPP02686 304 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 RAB5CP51148 216 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 HLA-DRB3P79483 266 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 PXDC1Q5TGL8 231 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 OR4A4PQ8NGN8 299 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 LYPD6BQ8NI32 183 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 MRPL30Q8TCC3 161 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 GLYATL2Q8WU03 294 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 NARS2Q96I59 477 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 RHOVQ96L33 236 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 MS4A10Q96PG2 267 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 TSNAXQ99598 290 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 PARP12Q9H0J9 701 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 TMEM222Q9H0R3 208 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 OR2S2Q9NQN1 319 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 TRAPPC2LQ9UL33 140 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 FOXA2Q9Y261 457 aaPredicted RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 LSM5Q9Y4Y9 91 aaKnown RBP7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 HECTD4Q9Y4D8 3996 aa7.01□□□□□ -1.29
CHMP4A-205ENST00000531158 IZUMO1RA6ND01 250 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 H0Y980 276 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 MPPED1O15442 326 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 MED6O75586 246 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 SCGB1D2O95969 90 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 HSPB1P04792 205 aaKnown RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 SLC25A6P12236 298 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 ADCYAP1P18509 176 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 PVALBP20472 110 aaPredicted RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 UCP1P25874 307 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 S100GP29377 79 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 SSBP2P81877 361 aaPredicted RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 DEFA5Q01523 94 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 TMEM30BQ3MIR4 351 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 PHLDA2Q53GA4 152 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 RPL39P5Q59GN2 51 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 BTNL8Q6UX41 500 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 LINC00322Q6ZN03 302 aaPredicted RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 LYZL2Q7Z4W2 148 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 SLC35G3Q8N808 338 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 CLRN3Q8NCR9 226 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 OR4C12Q96R67 309 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 TP53RKQ96S44 253 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 FAM110AQ9BQ89 295 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 SPATA25Q9BR10 227 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 GINS3Q9BRX5 216 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 C11orf1Q9H5F2 150 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 FAM212BQ9NTI7 297 aaPredicted RBP7□□□□□ -1.29
CHMP4A-205ENST00000531158 UQCC1Q9NVA1 299 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 JPT1Q9UK76 154 aa7□□□□□ -1.29
CHMP4A-205ENST00000531158 RRHO14718 337 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 TSPAN4O14817 238 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 ST8SIA5O15466 376 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 YPEL1O60688 119 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 PROP1O75360 226 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 PITX3O75364 302 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 SNAPINO95295 136 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 H2AFB1P0C5Y9 115 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 CT45A6P0DMU7 189 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 CT45A5P0DMU8 189 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 CT45A7P0DMV0 189 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 SPP1P10451 314 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 ATF4P18848 351 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 GNRHRP30968 328 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 LPAR6P43657 344 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 LINC00205P59089 165 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 TPPP2P59282 170 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 HTD2P86397 168 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 BAXQ07812 192 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 ZNF266Q14584 549 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 HMGN3Q15651 99 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 IGSF11Q5DX21 431 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 NMSQ5H8A3 153 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 TBC1D26Q86UD7 250 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 FAM219AQ8IW50 185 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 CMTM1Q8IZ96 169 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 LFNGQ8NES3 379 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 YPEL2Q96QA6 119 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 DNAH10Q8IVF4 4471 aa6.99□□□□□ -1.29
CHMP4A-205ENST00000531158 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 F8W036 122 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 H0YJW9 148 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 RBMXL2O75526 392 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 CA2P00918 260 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 TRBV12-3P01733 135 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 CD5P06127 495 aa6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 NKX2-1P43699 371 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 KLF5Q13887 457 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-205ENST00000531158 SP6Q3SY56 376 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms