RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ACTL6BO94805 426 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 FSTL3O95633 263 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 CD3EP07766 207 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 IGHV1-8P0DP01 117 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 HIST1H1BP16401 226 aaKnown RBP13.94□□□□□ -0.18
BRCA2-204ENST00000530893 LGALS7P47929 136 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 REG1BP48304 166 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 CLEC12BQ2HXU8 276 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 VMA21Q3ZAQ7 101 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 MOB3BQ86TA1 216 aa13.94□□□□□ -0.18
BRCA2-204ENST00000530893 AURKAIP1Q9NWT8 199 aaPredicted RBP13.94□□□□□ -0.18
BRCA2-204ENST00000530893 A0A0U1RQK1 487 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 ZNF320A2RRD8 509 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 IGLV2-23P01705 113 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 PRR30Q53SZ7 412 aaPredicted RBP13.93□□□□□ -0.18
BRCA2-204ENST00000530893 MAP1BP46821 2468 aaKnown RBP13.93□□□□□ -0.18
BRCA2-204ENST00000530893 A0A1W2PRE2 83 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 C8orf88P0DMB2 117 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
BRCA2-204ENST00000530893 MRPL41Q8IXM3 137 aaKnown RBP13.93□□□□□ -0.18
BRCA2-204ENST00000530893 FAM122AQ96E09 287 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 SLC25A33Q9BSK2 321 aa13.93□□□□□ -0.18
BRCA2-204ENST00000530893 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
BRCA2-204ENST00000530893 SCNM1Q9BWG6 230 aa13.92□□□□□ -0.18
BRCA2-204ENST00000530893 TMEM133Q9H2Q1 129 aa13.92□□□□□ -0.18
BRCA2-204ENST00000530893 ZNF430Q9H8G1 570 aaPredicted RBP13.92□□□□□ -0.18
BRCA2-204ENST00000530893 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
BRCA2-204ENST00000530893 OR7C2O60412 319 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 WT1-ASQ06250 92 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 TMEM37Q8WXS4 190 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 ZNF503Q96F45 646 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 APC2O95996 2303 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.91□□□□□ -0.18
BRCA2-204ENST00000530893 PSMB11A5LHX3 300 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 HELTA6NFD8 242 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 E7EUB6 86 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 CNN1P51911 297 aaKnown RBP13.91□□□□□ -0.18
BRCA2-204ENST00000530893 CASP6P55212 293 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 SELENOTP62341 195 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 MLANAQ16655 118 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 FBXL19-AS1Q494R0 122 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 C11orf42Q8N5U0 333 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 OR5R1Q8NH85 324 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 RALYQ9UKM9 306 aaKnown RBP13.91□□□□□ -0.18
BRCA2-204ENST00000530893 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
BRCA2-204ENST00000530893 CGB1A6NKQ9 187 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 K7EN84 100 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 GATA2P23769 480 aaPredicted RBP13.9□□□□□ -0.18
BRCA2-204ENST00000530893 YPEL3P61236 119 aaPredicted RBP13.9□□□□□ -0.18
BRCA2-204ENST00000530893 TEX45Q8NA69 505 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 OR1L4Q8NGR5 311 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 DNAJC4Q9NNZ3 241 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 ATMQ13315 3056 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 AMBPP02760 352 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 OR10J4P0C629 311 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 GNG4P50150 75 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 PPOXP50336 477 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 THAP8Q8NA92 274 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 OR2T6Q8NHC8 308 aa13.9□□□□□ -0.18
BRCA2-204ENST00000530893 RBP4P02753 201 aa13.89□□□□□ -0.19
BRCA2-204ENST00000530893 PRRX1P54821 245 aa13.89□□□□□ -0.19
BRCA2-204ENST00000530893 JOSD1Q15040 202 aaPredicted RBP13.89□□□□□ -0.19
BRCA2-204ENST00000530893 ETFRF1Q6IPR1 90 aa13.89□□□□□ -0.19
BRCA2-204ENST00000530893 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
BRCA2-204ENST00000530893 PCNX1Q96RV3 2341 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 SLC25A17O43808 307 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 CRYBB3P26998 211 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 BPIFB3P59826 476 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 PVRIGQ6DKI7 326 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
BRCA2-204ENST00000530893 ZNF90Q03938 601 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 CENPWQ5EE01 88 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 MMD2Q8IY49 270 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 TMEM18Q96B42 140 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 FAM167A-AS1Q96KT0 104 aa13.88□□□□□ -0.19
BRCA2-204ENST00000530893 FNDC4Q9H6D8 234 aaPredicted RBP13.88□□□□□ -0.19
BRCA2-204ENST00000530893 ROS1P08922 2347 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 IGLV1-47P01700 117 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 FAM87AP0C7U9 286 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 TIGITQ495A1 244 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 SLC25A2Q9BXI2 301 aa13.87□□□□□ -0.19
BRCA2-204ENST00000530893 IGHV2-26A0A0B4J1V2 119 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 A0A1W2PPI3 338 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 COX7A2P2O60397 106 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 GCGP01275 180 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 HNF1AP20823 631 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 RPEL1Q2QD12 228 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 C10orf55Q5SWW7 151 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 MUC15Q8N387 334 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 BEND2Q8NDZ0 799 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 NPIPB3Q92617 1050 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 CA7P43166 264 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 MRGPRG-AS1Q2M3A8 158 aa13.86□□□□□ -0.19
BRCA2-204ENST00000530893 C10orf113Q5VZT2 155 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms