RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CTSZQ9UBR2 303 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RBM7Q9Y580 266 aaKnown RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 HYDINQ4G0P3 5121 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 RYR1P21817 5038 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 A0A087X0K7 114 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 LINC01548A6NM66 108 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 MPTX1A8MV57 137 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 M0QXV9 152 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 SIVA1O15304 175 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 PHF1O43189 567 aaPredicted RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 NDUFB3O43676 98 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR2A4O95047 310 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 DUS4LO95620 317 aaKnown RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 IGLV2-14P01704 120 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 C1QBP02746 253 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 GIPP09681 153 aaPredicted RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 CGB3P0DN86 165 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 CGB7P0DN87 165 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 RND3P61587 244 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 NUTF2P61970 127 aaKnown RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 RPL31P62899 125 aaKnown RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 PRB3Q04118 309 aaPredicted RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 TLE4Q04727 773 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 TNXAQ16473 311 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 RNF212Q495C1 297 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR2B11Q5JQS5 317 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 FAM71F2Q6NXP2 309 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 Q6ZSV7 163 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 Q75L30 129 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 TMEM144Q7Z5S9 345 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 DRAM1Q8N682 238 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 ZNF738Q8NE65 137 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR51H1Q8NH63 302 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR5R1Q8NH85 324 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 PTH2Q96A98 100 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 ZNF486Q96H40 463 aaPredicted RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 SEC22AQ96IW7 307 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR2A7Q96R45 310 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 TP53RKQ96S44 253 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 TSNAXQ99598 290 aaKnown RBP3.37□□□□□ -1.87
CD44-226ENST00000527889 CCL19Q99731 98 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 VPS25Q9BRG1 176 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 PDCD10Q9BUL8 212 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 SUCNR1Q9BXA5 334 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 OR2D2Q9H210 308 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 RAB18Q9NP72 206 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 PLSCR3Q9NRY6 295 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 COA4Q9NYJ1 87 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 IDI2-AS1Q9NZ38 188 aa3.37□□□□□ -1.87
CD44-226ENST00000527889 FXYD6-FXYD2A0A087WZ82 144 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 TRAV14DV4A0A0A6YYC5 116 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 A0A0B4J2A0 478 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 C3orf85A0A1B0GTC6 90 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 KBTBD11-OT1A0A1B0GTJ5 212 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 A0A1W2PRD5 423 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 hADV38S2A0JD32 116 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 CLDN34H7C241 214 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 NBR2O15453 112 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 PGLYRP1O75594 196 aaPredicted RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 CNIH1O95406 144 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 IGHV4-39P01824 125 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 COX6B1P14854 86 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 GZMHP20718 246 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 S100GP29377 79 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 GPR6P46095 362 aaPredicted RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 EFNA4P52798 201 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 DLX1P56177 255 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 DLX6P56179 175 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 LINC00205P59089 165 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 RPL30P62888 115 aaKnown RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 LRRC37A5PQ49AS3 106 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 MORN2Q502X0 79 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 RPL39P5Q59GN2 51 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 PAPPA-AS1Q5QFB9 102 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 WDR25Q64LD2 544 aaPredicted RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 LAMTOR1Q6IAA8 161 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 LPCAT3Q6P1A2 487 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 CD164L2Q6UWJ8 174 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 GSG1LQ6UXU4 331 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 C19orf35Q6ZS72 473 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 LYZL2Q7Z4W2 148 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 PRIMA1Q86XR5 153 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 CMTM1Q8IZ96 169 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 ZNF525Q8N782 197 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 ZNF645Q8N7E2 425 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 OR8B3Q8NGG8 313 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 RBMXL1Q96E39 390 aaKnown RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 GALNT14Q96FL9 552 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 TIMD4Q96H15 378 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 OR10C1Q96KK4 312 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 C2orf50Q96LR7 162 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 NOL4LQ96MY1 436 aaPredicted RBP3.36□□□□□ -1.87
CD44-226ENST00000527889 OR8B2Q96RD0 313 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 TMEM222Q9H0R3 208 aa3.36□□□□□ -1.87
CD44-226ENST00000527889 ARV1Q9H2C2 271 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms