RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 C1orf185Q5T7R7 199 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF833PQ6ZTB9 187 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 PNKDQ8N490 385 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 ZADH2Q8N4Q0 377 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 OR1L8Q8NGR8 309 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 TBX15Q96SF7 602 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 RNASE7Q9H1E1 156 aaKnown RBP9.49□□□□□ -0.89
LINC01001-201ENST00000526704 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 TEX36Q5VZQ5 186 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 MRPL20Q9BYC9 149 aaKnown RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 PARD6AQ9NPB6 346 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 TRBV9A0A0B4J1U6 114 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 RPLP1P05386 114 aaKnown RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 CD69Q07108 199 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 FXYD3Q14802 87 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 TPTE2P1Q5T6R2 138 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
LINC01001-201ENST00000526704 CNOT1A5YKK6 2376 aaKnown RBP9.48□□□□□ -0.89
LINC01001-201ENST00000526704 PSMB11A5LHX3 300 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 NPSP0C0P6 89 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 CDKN1AP38936 164 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 ATP5IP56385 69 aaPredicted RBP9.47□□□□□ -0.89
LINC01001-201ENST00000526704 Q0VG73 95 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 TOMM20LQ6UXN7 152 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 OSTCQ9NRP0 149 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 LINC00312Q9Y6C7 94 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 EP300Q09472 2414 aaPredicted RBP9.47□□□□□ -0.89
LINC01001-201ENST00000526704 TNFSF4P23510 183 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 CD40P25942 277 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 TAS2R45P59539 299 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 SELENOVP59797 346 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 RANP62826 216 aaKnown RBP9.47□□□□□ -0.89
LINC01001-201ENST00000526704 CX3CL1P78423 397 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 MORN5Q5VZ52 161 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 SLC25A33Q9BSK2 321 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 C19orf24Q9BVV8 132 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
LINC01001-201ENST00000526704 RP1L1Q8IWN7 2480 aaPredicted RBP9.47□□□□□ -0.89
LINC01001-201ENST00000526704 hADV38S2A0JD32 116 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 C8orf88P0DMB2 117 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 SSBP2P81877 361 aaPredicted RBP9.46□□□□□ -0.89
LINC01001-201ENST00000526704 FAM27E3Q08E93 113 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 TIGITQ495A1 244 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 BAGE3Q86Y29 109 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 BAGE2Q86Y30 109 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 HARBI1Q96MB7 349 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 NDUFA4L2Q9NRX3 87 aa9.46□□□□□ -0.89
LINC01001-201ENST00000526704 BSNQ9UPA5 3926 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 H0YJW9 148 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 SPINK4O60575 86 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 FCN3O75636 299 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 IRF2P14316 349 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 CHRNB4P30926 498 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 PPOXP50336 477 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
LINC01001-201ENST00000526704 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 IGFL3Q6UXB1 125 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 OR2T6Q8NHC8 308 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.9
LINC01001-201ENST00000526704 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
LINC01001-201ENST00000526704 GNB4Q9HAV0 340 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
LINC01001-201ENST00000526704 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 E7EUB6 86 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 DLL1O00548 723 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 ISLRO14498 428 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
LINC01001-201ENST00000526704 TCL1AP56279 114 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 NKX6-3A6NJ46 265 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 PLXNB1O43157 2135 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 APOA2P02652 100 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 MT-ND6P03923 174 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 CCL3L1P16619 93 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
LINC01001-201ENST00000526704 RPL8P62917 257 aaKnown RBP9.45□□□□□ -0.9
LINC01001-201ENST00000526704 SLC35B1P78383 322 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 CCL8P80075 99 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 WDR73Q6P4I2 378 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 IGF2-ASQ6U949 168 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 NUP37Q8NFH4 326 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
LINC01001-201ENST00000526704 REG1BP48304 166 aa9.44□□□□□ -0.9
LINC01001-201ENST00000526704 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms