RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 SLX4Q8IY92 1834 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 IGHV3OR16-8A0A075B7F1 116 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 LOC101059948A0A1B0GTJ6 334 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 ITGB1BP1O14713 200 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 LILRA1O75019 489 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 NSUN5P1Q3KNT7 163 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 CFHR5Q9BXR6 569 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 RNASE7Q9H1E1 156 aaKnown RBP7.9□□□□□ -1.14
CTNND1-213ENST00000526357 USP54Q70EL1 1684 aa7.9□□□□□ -1.14
CTNND1-213ENST00000526357 LOC102723996A0A087X1L8 192 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 IGHV2OR16-5A0A0B4J2B6 119 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 TNFRSF6BO95407 300 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 FAM27E3Q08E93 113 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 ATP1A1-AS1Q5TC04 95 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 ARAP2Q8WZ64 1704 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 CCL1P22362 96 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 EVI2AP22794 236 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.15
CTNND1-213ENST00000526357 HOXD3P31249 432 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-213ENST00000526357 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 IQCF6A8MYZ5 107 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 CD300EQ496F6 205 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-213ENST00000526357 ZP1P60852 638 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
CTNND1-213ENST00000526357 C3orf36Q3SXR2 165 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 C15orf61A6NNL5 157 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 INS-IGF2F8WCM5 200 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 INSP01308 110 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 RHOGP84095 191 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 FAM181AQ8N9Y4 354 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 IFI27L1Q96BM0 104 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 ANAPC10Q9UM13 185 aa7.89□□□□□ -1.15
CTNND1-213ENST00000526357 YPEL1O60688 119 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 GATA2P23769 480 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 SP7Q8TDD2 431 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 RCHY1Q96PM5 261 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 YPEL2Q96QA6 119 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 C1QTNF5Q9BXJ0 243 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 PAPPAQ13219 1627 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 TTC3P53804 2025 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 A0A1W2PRE2 83 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 C17orf100A8MU93 164 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 LEPROTO15243 131 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 CD5P06127 495 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 IGLV3-21P80748 117 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 C18orf12Q96KH6 178 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 RTBDNQ9BSG5 229 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 SAA2-SAA4A0A096LPE2 208 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 TMEM8BA6NDV4 472 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 SAA2P0DJI9 122 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 PAX8Q06710 450 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 ZNF646O15015 1829 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 FDCSPQ8NFU4 85 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 NDUFAF3Q9BU61 184 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 DOCK1Q14185 1865 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 A0A0G2JK05 382 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 WISP3O95389 354 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-213ENST00000526357 WNT2P09544 360 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 TEX43Q6ZNM6 134 aa7.88□□□□□ -1.15
CTNND1-213ENST00000526357 FAM90A9PA6NNJ1 464 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 SMIM10L1P0DMW3 83 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 PRTN3P24158 256 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 RPL36AP83881 106 aaKnown RBP7.87□□□□□ -1.15
CTNND1-213ENST00000526357 Q5BKY6 102 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 FAM201AQ5SY85 155 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 SPRED2Q7Z698 418 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 TSKUQ8WUA8 353 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 RPL36ALQ969Q0 106 aaKnown RBP7.87□□□□□ -1.15
CTNND1-213ENST00000526357 SMIM10Q96HG1 83 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 TMEM133Q9H2Q1 129 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 OR9G9P0C7N8 305 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 NPC2P61916 151 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 SPSB2Q99619 263 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 GON4LQ3T8J9 2241 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 CEACAM8P31997 349 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-213ENST00000526357 LTBRP36941 435 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 DSCR9P59020 149 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 PPP1R32Q7Z5V6 425 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 HAPLN4Q86UW8 402 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 RNASE6Q93091 150 aaKnown RBP7.87□□□□□ -1.15
CTNND1-213ENST00000526357 TRAV5A0A0B4J249 113 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 A0A1W2PRS3 328 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 IFITM2Q01629 132 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 FAM166AQ6J272 317 aa7.87□□□□□ -1.15
CTNND1-213ENST00000526357 THBDP07204 575 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 UMODP07911 640 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 OCIAD2Q56VL3 154 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 SAP30O75446 220 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 ERCC8Q13216 396 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 NR2C2APQ86WQ0 139 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 CTHRC1Q96CG8 243 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 RAMP1O60894 148 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 C1QCP02747 245 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 LINC00271P0C7V0 271 aa7.86□□□□□ -1.15
CTNND1-213ENST00000526357 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms