RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 BIKQ13323 160 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 PPP1R1AQ13522 171 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 PEA15Q15121 130 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 TOMM34Q15785 309 aaPredicted RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 TAL2Q16559 108 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 ABCA11PQ4W5N1 156 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 RNASE10Q5GAN6 216 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 TMEM244Q5VVB8 128 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 Q6ZSR6 202 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 LHFPL1Q86WI0 220 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 DRAM1Q8N682 238 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 OR51A4Q8NGJ6 313 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 AMELYQ99218 206 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 C20orf144Q9BQM9 153 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 PDCD10Q9BUL8 212 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 TOLLIPQ9H0E2 274 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 TLNRD1Q9H1K6 362 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 PARP11Q9NR21 331 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 SMCO4Q9NRQ5 59 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 CKLFQ9UBR5 152 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 RAB22AQ9UL26 194 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 NOP16Q9Y3C1 178 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 WIF1Q9Y5W5 379 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 R4GMQ9 66 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 CEP350Q5VT06 3117 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 TRAV36DV7A0A075B6V5 113 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 IGHV3-72A0A0B4J1Y9 119 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 LOC107986453A0A1B0GWG9 222 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 A0A1W2PQD3 144 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 TMEM14DPA8MWL7 114 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 LINC00587B1AMM8 73 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 SEC14L6B5MCN3 397 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 PRAMEF26H0Y7S4 382 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 K7EQS6 105 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 FADS1O60427 444 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 RPP14O95059 124 aaKnown RBP3.5□□□□□ -1.85
SKP1-213ENST00000524288 SFT2D2O95562 160 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 MT-ND4LP03901 98 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 MAS1P04201 325 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 PET100P0DJ07 73 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 LIPCP11150 499 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 MUC1P15941 1255 aaPredicted RBP3.5□□□□□ -1.85
SKP1-213ENST00000524288 CCNOP22674 350 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 GRPRP30550 384 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 RPL35P42766 123 aaKnown RBP3.5□□□□□ -1.85
SKP1-213ENST00000524288 MLF1P58340 268 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
SKP1-213ENST00000524288 SKP1P63208 163 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 SURF2Q15527 256 aaPredicted RBP3.5□□□□□ -1.85
SKP1-213ENST00000524288 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
SKP1-213ENST00000524288 C5orf46Q6UWT4 87 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 DGAT2L6Q6ZPD8 337 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 ZNF615Q8N8J6 731 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 OR4D6Q8NGJ1 314 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 OR6N2Q8NGY6 317 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 OR8K3Q8NH51 312 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 HIST1H2BAQ96A08 127 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 ARL5BQ96KC2 179 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 YPEL4Q96NS1 127 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 SCRT1Q9BWW7 348 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 ATG5Q9H1Y0 275 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 TXNIPQ9H3M7 391 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 TAS2R4Q9NYW5 299 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 VAX2Q9UIW0 290 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 HHLA2Q9UM44 414 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 HTTP42858 3142 aa3.5□□□□□ -1.85
SKP1-213ENST00000524288 MEIS3P1A6NDR6 274 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 TMEM235A6NFC5 223 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 C2orf74A8MZ97 194 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 C1orf196B1AJZ1 125 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 S100A6P06703 90 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 FABP1P07148 127 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 FBP1P09467 338 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SFTA3P0C7M3 94 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 S100PP25815 95 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 LPAR6P43657 344 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 KCNJ3P48549 501 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 AKR1D1P51857 326 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 LINC00315P59091 139 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 BTG2P78543 158 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 FAM3AP98173 230 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 ZNF117Q03924 483 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 RHEBQ15382 184 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 PRSS8Q16651 343 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 TMEM128Q5BJH2 165 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 GLYATL3Q5SZD4 288 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 TMED4Q7Z7H5 227 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 TRAPPC6BQ86SZ2 158 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 NAA40Q86UY6 237 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SLC22A24Q8N4F4 322 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 ZNF561Q8N587 486 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 GATSQ8NAP1 163 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 OR5T1Q8NG75 326 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 OR8G5Q8NG78 346 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 RNF133Q8WVZ7 376 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 CPNE4Q96A23 557 aaPredicted RBP3.49□□□□□ -1.85
SKP1-213ENST00000524288 CLDN23Q96B33 292 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SLC25A44Q96H78 314 aaPredicted RBP3.49□□□□□ -1.85
SKP1-213ENST00000524288 C2orf50Q96LR7 162 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms