RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 MBD6Q96DN6 1003 aa8.4□□□□□ -1.06
SPIDR-225ENST00000524141 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
SPIDR-225ENST00000524141 NCOR1P1Q9H4R4 102 aa8.4□□□□□ -1.06
SPIDR-225ENST00000524141 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.06
SPIDR-225ENST00000524141 IGKV1OR2-108A0A075B7D4 117 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 IGHV2-70DA0A0C4DH43 119 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 SAA2P0DJI9 122 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 CDKN1BP46527 198 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 FABP6P51161 128 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 Q56UQ5 140 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 LCN12Q6JVE5 192 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 IGHV3-13P01766 116 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 IGHV3-7P01780 117 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 CFHR2P36980 270 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 FBLN7Q53RD9 439 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 ALKBH7Q9BT30 221 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 TNFRSF19Q9NS68 423 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 ZNF355PQ9NSJ1 428 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 AMMECR1Q9Y4X0 333 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 C9orf172C9J069 976 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 COTL1Q14019 142 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 MAJINQ3KP22 176 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 EBLN2Q6P2I7 272 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 RNASEKQ6P5S7 137 aaKnown RBP8.39□□□□□ -1.07
SPIDR-225ENST00000524141 NUP35Q8NFH5 326 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 OR4C5Q8NGB2 326 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 OR1L8Q8NGR8 309 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 CACNG8Q8WXS5 425 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
SPIDR-225ENST00000524141 FRYLO94915 3013 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 IGLL1P15814 213 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 COL8A2P25067 703 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 TMEM164Q5U3C3 297 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 ZNF596Q8TC21 504 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 ZNF714Q96N38 554 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 SSBP3Q9BWW4 388 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-225ENST00000524141 ST20Q9HBF5 79 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 FZR1Q9UM11 496 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 MED13Q9UHV7 2174 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 UPK2O00526 184 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 CECR9P0C854 216 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-225ENST00000524141 NHLRC2Q8NBF2 726 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 OR2Z1Q8NG97 314 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 FAM168AQ92567 244 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 SNRNP40Q96DI7 357 aaKnown RBP8.38□□□□□ -1.07
SPIDR-225ENST00000524141 FAM122AQ96E09 287 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 SMIM12Q96EX1 92 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 FER1L6-AS2Q96M78 137 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 SLC25A2Q9BXI2 301 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 C1RLQ9NZP8 487 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 CLCF1Q9UBD9 225 aa8.38□□□□□ -1.07
SPIDR-225ENST00000524141 PEX7O00628 323 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 AGFG2O95081 481 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 CGB3P0DN86 165 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 CGB7P0DN87 165 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-225ENST00000524141 CD69Q07108 199 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 LYG1Q8N1E2 194 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 FAM167A-AS1Q96KT0 104 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 KBTBD11-OT1A0A1B0GTJ5 212 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-225ENST00000524141 RPL8P62917 257 aaKnown RBP8.37□□□□□ -1.07
SPIDR-225ENST00000524141 LRRC10Q5BKY1 277 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 MOB3BQ86TA1 216 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 ZNRF1Q8ND25 227 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 OR1L4Q8NGR5 311 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
SPIDR-225ENST00000524141 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 LOC105371242A0A075B767 164 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
SPIDR-225ENST00000524141 BPIFB3P59826 476 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 RPS20P60866 119 aaKnown RBP8.36□□□□□ -1.07
SPIDR-225ENST00000524141 C17orf58Q2M2W7 97 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 TMEM30BQ3MIR4 351 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 TMEM105Q8N8V8 129 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 TMEM178AQ8NBL3 297 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-225ENST00000524141 COX7A2P2O60397 106 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 IGLV1-44P01699 117 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 MYOD1P15172 320 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 REG1BP48304 166 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 GDF5OSQ5U4N7 250 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
SPIDR-225ENST00000524141 LEAP2Q969E1 77 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms