RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 STMN3Q9NZ72 180 aa2□□□□□ -2.09
SKP1-212ENST00000523966 ZNF391Q9UJN7 358 aa2□□□□□ -2.09
SKP1-212ENST00000523966 BOKQ9UMX3 212 aaPredicted RBP2□□□□□ -2.09
SKP1-212ENST00000523966 C14orf166Q9Y224 244 aaKnown RBP2□□□□□ -2.09
SKP1-212ENST00000523966 HDGFL3Q9Y3E1 203 aa2□□□□□ -2.09
SKP1-212ENST00000523966 CHCHD2Q9Y6H1 151 aaPredicted RBP2□□□□□ -2.09
SKP1-212ENST00000523966 NUP210LQ5VU65 1888 aa2□□□□□ -2.09
SKP1-212ENST00000523966 MUC3AQ02505 3323 aa2□□□□□ -2.09
SKP1-212ENST00000523966 DNAH14Q0VDD8 3507 aa2□□□□□ -2.09
SKP1-212ENST00000523966 NCOA6Q14686 2063 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 PCNX1Q96RV3 2341 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 IGKV1D-42A0A075B6H8 117 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TRAV27A0A087WT01 109 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 PNMA8CA0A1B0GUJ8 204 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 DAPL1A0PJW8 107 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 KLRC4-KLRK1H3BQV0 150 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 KPNA4O00629 521 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 PLPP3O14495 311 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 PHYHO14832 338 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 SULT1C4O75897 302 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 IGHMP01871 453 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 SOD3P08294 240 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 INAFM2P0DMQ5 153 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 HIST1H1CP16403 213 aaKnown RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 UGT2B10P36537 528 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 MAP2K4P45985 399 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 FXYD6P3P58550 94 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TSPAN5P62079 268 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 GLO1Q04760 184 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 RPL18Q07020 188 aaKnown RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 MLLT11Q13015 90 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 KRR1Q13601 381 aaKnown RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 TPBGQ13641 420 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 GUSBP1Q15486 140 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 PLPPR5Q32ZL2 321 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TMEM176BQ3YBM2 270 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 LGALSLQ3ZCW2 172 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 CCDC58Q4VC31 144 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ACTL10Q5JWF8 245 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ZNF322Q6U7Q0 402 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 PLEKHG7Q6ZR37 379 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TMPPEQ6ZT21 453 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 SPERTQ8NA61 448 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ZFP62Q8NB50 900 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 DEFB124Q8NES8 71 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 OR2M3Q8NG83 312 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 OR8D4Q8NGM9 314 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 OR4K13Q8NH42 304 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 CASTOR1Q8WTX7 329 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 S100ZQ8WXG8 99 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ASB17Q8WXJ9 295 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 CACNG8Q8WXS5 425 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TMIGD2Q96BF3 282 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 C12orf43Q96C57 262 aaKnown RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 RBP7Q96R05 134 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 YIPF3Q9GZM5 350 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 OR51V1Q9H2C8 321 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 TXNIPQ9H3M7 391 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 DSN1Q9H410 356 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 PAQR5Q9NXK6 330 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 BABAM2Q9NXR7 383 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 MED11Q9P086 117 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ENPP5Q9UJA9 477 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 DKKL1Q9UK85 242 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 MCTS1Q9ULC4 181 aaKnown RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 SSR3Q9UNL2 185 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 IER3IP1Q9Y5U9 82 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 ZNF706Q9Y5V0 76 aaPredicted RBP1.99□□□□□ -2.09
SKP1-212ENST00000523966 ICOSQ9Y6W8 199 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 NBASA2RRP1 2371 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 KMT2EQ8IZD2 1858 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 PTPRQQ9UMZ3 2332 aa1.99□□□□□ -2.09
SKP1-212ENST00000523966 POLEQ07864 2286 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZNF292O60281 2723 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 EML6Q6ZMW3 1958 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 EXPH5Q8NEV8 1989 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SPTBN4Q9H254 2564 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 TRAV17A0A0B4J275 112 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 LOC100506127A0A0U1RQW1 187 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SPAARA0A1B0GVQ0 90 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 TRDV1A0A1B0GX56 115 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 A0A1W2PQL4 384 aaPredicted RBP1.98□□□□□ -2.09
SKP1-212ENST00000523966 RBFOX3A6NFN3 312 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 FAM183AA6NL82 134 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZNF879B4DU55 563 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 FTCDNL1E5RQL4 147 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ZNF670-ZNF695F2Z2N8 137 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 J3QRE1 110 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 K7EPK0 472 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 M0R129 80 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 GPR171O14626 319 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SYNGR2O43760 224 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 ARL6IP5O75915 188 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 CD8AP01732 235 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 LIMS3P0CW19 117 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 LIMS4P0CW20 117 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 CCL3P10147 92 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 SPI1P17947 270 aa1.98□□□□□ -2.09
SKP1-212ENST00000523966 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms