RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 NPBWR1P48145 328 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
LSM1-205ENST00000523511 CD81P60033 236 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 DUSP18Q8NEJ0 188 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 PINX1Q96BK5 328 aaKnown RBP12.33□□□□□ -0.44
LSM1-205ENST00000523511 NEURL2Q9BR09 285 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 C5orf66Q9H5L9 145 aa12.33□□□□□ -0.44
LSM1-205ENST00000523511 DAZ1Q9NQZ3 744 aaKnown RBP12.33□□□□□ -0.44
LSM1-205ENST00000523511 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 TMEM213A2RRL7 107 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 K7EIM0 57 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 K7EMT4 169 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 GNG7O60262 68 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 MT-CO2P00403 227 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
LSM1-205ENST00000523511 INPP1P49441 399 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 MFAP2P55001 183 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 SPCS3P61009 180 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 SRPXP78539 464 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 TM4SF20Q53R12 229 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 NOXA1Q86UR1 476 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
LSM1-205ENST00000523511 TNCP24821 2201 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 ZNF785A8K8V0 405 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 YIF1AO95070 293 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 P0C879 139 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 BMI1P35226 326 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 ETV6P41212 452 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 ADAMTSL5Q6ZMM2 481 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 TMEM190Q8WZ59 177 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 GALNT14Q96FL9 552 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
LSM1-205ENST00000523511 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 TMEM56-RWDD3S4R434 201 aa12.31□□□□□ -0.44
LSM1-205ENST00000523511 C15orf62A8K5M9 175 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 I3L2K1 104 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 AKR1C4P17516 323 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 HTR2BP41595 481 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 IZUMO4Q1ZYL8 232 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
LSM1-205ENST00000523511 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
LSM1-205ENST00000523511 RPS10-NUDT3A0A1W2PQS6 291 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 OR11H12B2RN74 326 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 CTSGP08311 255 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 SPINK9Q5DT21 86 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 BTNL8Q6UX41 500 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 LGI3Q8N145 548 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 CHRDL1Q9BU40 450 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
LSM1-205ENST00000523511 MLXQ9UH92 298 aa12.29□□□□□ -0.44
LSM1-205ENST00000523511 CEBPZOSA8MTT3 80 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 CD5P06127 495 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 SULT1A3P0DMM9 295 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 SULT1A4P0DMN0 295 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 CCDC190Q86UF4 302 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 TMEM61Q8N0U2 210 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 WDR89Q96FK6 387 aaPredicted RBP12.28□□□□□ -0.44
LSM1-205ENST00000523511 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
LSM1-205ENST00000523511 RBM38Q9H0Z9 239 aaKnown RBP12.28□□□□□ -0.44
LSM1-205ENST00000523511 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 A0A0B4J2A0 478 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.45
LSM1-205ENST00000523511 OPRK1P41145 380 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 CCR6P51684 374 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 CMC4P56277 68 aaPredicted RBP12.27□□□□□ -0.45
LSM1-205ENST00000523511 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
LSM1-205ENST00000523511 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 TMEM128Q5BJH2 165 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 ETFRF1Q6IPR1 90 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 GPR146Q96CH1 333 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 SPAG8Q99932 426 aaPredicted RBP12.27□□□□□ -0.45
LSM1-205ENST00000523511 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 CACNG5Q9UF02 275 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 SHPKQ9UHJ6 478 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 V9GYH0 126 aa12.27□□□□□ -0.45
LSM1-205ENST00000523511 TRAV30A0A087WSZ9 112 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 CENPXA8MT69 81 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 CD7P09564 240 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 ADMP35318 185 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 TMEM187Q14656 261 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 HAGHQ16775 308 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 TRIQKQ629K1 86 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 Q6ZRM9 215 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 TMED4Q7Z7H5 227 aa12.26□□□□□ -0.45
LSM1-205ENST00000523511 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
LSM1-205ENST00000523511 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms