RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	ORC6	Q9Y5N6	252 aa		2.93	□□□□□ -1.94
CTNNA1-238	ENST00000523298	MYH9	P35579	1960 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TCHH	Q07283	1943 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ATG2A	Q2TAZ0	1938 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TRAV8-2	A0A0B4J237	113 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	IGKV1D-13	A0A0B4J2D9	117 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298		A0A0D9SFI3	127 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PLAC8L1	A1L4L8	177 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PINLYP	A6NC86	204 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	FAM183A	A6NL82	134 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	C12orf77	C9JDV5	145 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298		H7BYZ3	331 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	AGPAT2	O15120	278 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PDCD6	O75340	191 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CXorf1	O96002	111 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PTH	P01270	115 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	IFNA7	P01567	189 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	MAS1	P04201	325 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	EIF4E	P06730	217 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR4Q2	P0C623	313 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	IGKV1-13	P0DP09	117 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CRHBP	P24387	322 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ATP6V0C	P27449	155 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ATP5G3	P48201	142 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ZNF140	P52738	457 aa	Predicted RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CTBP2	P56545	445 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	NDUFA6	P56556	154 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	FKBP1A	P62942	108 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LOXL1	Q08397	574 aa	Predicted RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ZNF404	Q494X3	552 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	FAM74A1	Q5RGS3	127 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	GLT8D1	Q68CQ7	371 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	RPL22L1	Q6P5R6	122 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SCGB1D4	Q6XE38	83 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TCF23	Q7RTU1	214 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	DAZ4	Q86SG3	579 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LINC01555	Q8NAE3	123 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR10AD1	Q8NGE0	317 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR51A4	Q8NGJ6	313 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR8S1	Q8NH09	359 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PP6455	Q8WZ26	134 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TMEM158	Q8WZ71	300 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SLAMF6	Q96DU3	332 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	DERL3	Q96Q80	235 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ZNF471	Q9BX82	626 aa	Predicted RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	NOX3	Q9HBY0	568 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	DAZ1	Q9NQZ3	744 aa	Known RBP	2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CALY	Q9NYX4	217 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	WASHC3	Q9Y3C0	194 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	DOCK9	Q9BZ29	2069 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LOC285556	D6RIA3	1793 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	NFASC	O94856	1347 aa		2.92	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SSC5D	A1L4H1	1573 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TRAV5	A0A0B4J249	113 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LOC107984640	A0A0U1RRK4	108 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TMEM212	A6NML5	194 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298		H0YJW9	148 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LY6L	H3BQJ8	138 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	RPL36A-HNRNPH2	H7BZ11	118 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	AIP	O00170	330 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OVOL1	O14753	267 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	MRPS14	O60783	128 aa	Known RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	GYPC	P04921	128 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CRYBA1	P05813	215 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	IGHV4-34	P06331	123 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SOD3	P08294	240 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PAEP	P09466	180 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LINC00694	P0DN24	101 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	IL7	P13232	177 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CTLA4	P16410	223 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	RPS4Y1	P22090	263 aa	Known RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PPP1CC	P36873	323 aa	Known RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	LPAR6	P43657	344 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SLC18A1	P54219	525 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	DEFA3	P59666	94 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	S100A10	P60903	97 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	HLA-DRB3	P79483	266 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	MEF2B	Q02080	365 aa	Predicted RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	HSD52	Q0P140	79 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	PNOC	Q13519	176 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	KIAA0087	Q14695	138 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	JOSD1	Q15040	202 aa	Predicted RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	MMD	Q15546	238 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298		Q5BKY6	102 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	BCL2L15	Q5TBC7	163 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CNIH2	Q6PI25	160 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	UGT2A3	Q6UWM9	527 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	ANKRD29	Q8N6D5	301 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	NUP35	Q8NFH5	326 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR4S1	Q8NGB4	309 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR11G2	Q8NGC1	345 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR4K5	Q8NGD3	323 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR52R1	Q8NGF1	315 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR51T1	Q8NGJ9	327 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CCL17	Q92583	94 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	SLC25A44	Q96H78	314 aa	Predicted RBP	2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	TEX37	Q96LM6	180 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	CARD19	Q96LW7	228 aa		2.91	□□□□□ -1.94
CTNNA1-238	ENST00000523298	OR2M4	Q96R27	311 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms