RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 OR52E6Q96RD3 313 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BNQ99877 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H2BMQ99879 126 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 OR5AC2Q9NZP5 309 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 CKLFQ9UBR5 152 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 C22orf24Q9Y442 160 aa0.44□□□□□ -2.34
PCM1-217ENST00000522998 TOPBP1Q92547 1522 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 MYH10P35580 1976 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 HEATR1Q9H583 2144 aaKnown RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 TRAV14DV4A0A0A6YYC5 116 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 C19orf84I3L1E1 186 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 KCNK1O00180 336 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 OR5F1O95221 314 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 CALB1P05937 261 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H1EP10412 219 aaKnown RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 HIST1H1TP22492 207 aaPredicted RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 NKX2-5P52952 324 aaPredicted RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 HBA1P69905 142 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 IQCF2Q8IXL9 164 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 C20orf196Q8IYI0 205 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 WFDC11Q8NEX6 87 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 OR51D1Q8NGF3 324 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 MCFD2Q8NI22 146 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 KLK6Q92876 244 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 IMP4Q96G21 291 aaKnown RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 SCGB3A1Q96QR1 104 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 NIPSNAP1Q9BPW8 284 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 MRPS26Q9BYN8 205 aaKnown RBP0.43□□□□□ -2.34
PCM1-217ENST00000522998 MIXL1Q9H2W2 232 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 PRTFDC1Q9NRG1 225 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 CMTM6Q9NX76 183 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 FBXL12Q9NXK8 326 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 TP73-AS1Q9UF72 201 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 NUP155O75694 1391 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 MCM3APO60318 1980 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 KIAA1549Q9HCM3 1950 aa0.43□□□□□ -2.34
PCM1-217ENST00000522998 MYO18AQ92614 2054 aaKnown RBP0.42□□□□□ -2.34
PCM1-217ENST00000522998 CNTRLQ7Z7A1 2325 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 CHD3Q12873 2000 aaKnown RBP0.42□□□□□ -2.34
PCM1-217ENST00000522998 SBF1O95248 1867 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 A0A087WX48 190 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 A0A0D9SG52 128 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 OR2T1O43869 369 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 IFNA5P01569 189 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 HLA-DRB1P01911 266 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 COX6A1P12074 109 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 MIFP14174 115 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 PSME3P61289 254 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 SNRPD2P62316 118 aaKnown RBP0.42□□□□□ -2.34
PCM1-217ENST00000522998 PDE6HQ13956 83 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 CDK10Q15131 360 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 HIST2H3PS2Q5TEC6 136 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 TERB2Q8NHR7 220 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 TOMM6Q96B49 74 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 LINC00526Q96FQ7 95 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 MRPL57Q9BQC6 102 aaKnown RBP0.42□□□□□ -2.34
PCM1-217ENST00000522998 C20orf27Q9GZN8 174 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 GUCA1BQ9UMX6 200 aa0.42□□□□□ -2.34
PCM1-217ENST00000522998 SNAPC4Q5SXM2 1469 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 LAMA4Q16363 1823 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 RIC1Q4ADV7 1423 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 MYH7BA7E2Y1 1941 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 IGKV1D-42A0A075B6H8 117 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 TGIF2-C20orf24A0A0A6YYL0 155 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 C2orf70A6NJV1 201 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 FAAHO00519 579 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 FADS1O60427 444 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 IFNA10P01566 189 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 CRYGAP11844 174 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 CD79AP11912 226 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 FKBP2P26885 142 aaKnown RBP0.41□□□□□ -2.34
PCM1-217ENST00000522998 SPCS3P61009 180 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 IMPG1Q17R60 797 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 ACOT6Q3I5F7 207 aaPredicted RBP0.41□□□□□ -2.34
PCM1-217ENST00000522998 MIR17HGQ75NE6 70 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 PHF13Q86YI8 300 aaPredicted RBP0.41□□□□□ -2.34
PCM1-217ENST00000522998 LINC00471Q8N535 108 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 DDI1Q8WTU0 396 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 H1FXQ92522 213 aaKnown RBP0.41□□□□□ -2.34
PCM1-217ENST00000522998 PPP1R2P1Q96PQ5 205 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 TSPAN32Q96QS1 320 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 SLC50A1Q9BRV3 221 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 MRPL27Q9P0M9 148 aaKnown RBP0.41□□□□□ -2.34
PCM1-217ENST00000522998 TMEM56-RWDD3S4R434 201 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 MTUS2Q5JR59 1369 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 UNC13CQ8NB66 2214 aa0.41□□□□□ -2.34
PCM1-217ENST00000522998 ADGRB2O60241 1585 aa0.4□□□□□ -2.34
PCM1-217ENST00000522998 WRNQ14191 1432 aaPredicted RBP eCLIP0.4□□□□□ -2.34
PCM1-217ENST00000522998 CASP8AP2Q9UKL3 1982 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 DPRXA6NFQ7 191 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 BUB1B-PAK6H3BSN5 160 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 M0R036 132 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 M0R2N4 97 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 PSMD12O00232 456 aaPredicted RBP0.4□□□□□ -2.35
PCM1-217ENST00000522998 OR1I1O60431 355 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 AHSA1O95433 338 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 TCL1BO95988 128 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 SERPINA6P08185 405 aa0.4□□□□□ -2.35
PCM1-217ENST00000522998 ASAH2BP0C7U1 165 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms