RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FCAMRQ8WWV6 532 aa11.9□□□□□ -0.5
TRAM1-204ENST00000521049 YTHDF1Q9BYJ9 559 aaKnown RBP11.9□□□□□ -0.5
TRAM1-204ENST00000521049 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
TRAM1-204ENST00000521049 ST8SIA3O43173 380 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 G6PCP35575 357 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 CBX5P45973 191 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 HERV-K104P61576 105 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 MORN3Q6PF18 240 aaPredicted RBP11.89□□□□□ -0.51
TRAM1-204ENST00000521049 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 POM121L12Q8N7R1 296 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 TSC22D3Q99576 134 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 PKHD1P08F94 4074 aa11.89□□□□□ -0.51
TRAM1-204ENST00000521049 GNG7O60262 68 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 MT-CO2P00403 227 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
TRAM1-204ENST00000521049 RLN1P04808 185 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 TRPT1Q86TN4 253 aaKnown RBP11.88□□□□□ -0.51
TRAM1-204ENST00000521049 ZNF114Q8NC26 417 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 TSPAN14Q8NG11 270 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 AUNIPQ9H7T9 357 aa11.88□□□□□ -0.51
TRAM1-204ENST00000521049 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 ELOA3CA0A087WX78 387 aaPredicted RBP11.87□□□□□ -0.51
TRAM1-204ENST00000521049 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 RTL8CO15255 209 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 FCER2P06734 321 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 P0DMU3 169 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 FAM231AP0DMU4 169 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 FAM231CP0DMU5 169 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 SPP1P10451 314 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
TRAM1-204ENST00000521049 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 SPARTQ8N0X7 666 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 FAM24BQ8N5W8 94 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 OR5H6Q8NGV6 325 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 DIABLOQ9NR28 239 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 X6R8D5 127 aa11.87□□□□□ -0.51
TRAM1-204ENST00000521049 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
TRAM1-204ENST00000521049 NPBWR1P48145 328 aa11.86□□□□□ -0.51
TRAM1-204ENST00000521049 UBE2UQ5VVX9 321 aa11.86□□□□□ -0.51
TRAM1-204ENST00000521049 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
TRAM1-204ENST00000521049 TMEM231Q9H6L2 316 aa11.86□□□□□ -0.51
TRAM1-204ENST00000521049 IGHV3-48P01763 117 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 AMBPP02760 352 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 SDC2P34741 201 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 LGALS9BQ3B8N2 356 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
TRAM1-204ENST00000521049 ZFAND3Q9H8U3 227 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 FAM212BQ9NTI7 297 aaPredicted RBP11.85□□□□□ -0.51
TRAM1-204ENST00000521049 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 RABAC1Q9UI14 185 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 SSR3Q9UNL2 185 aa11.85□□□□□ -0.51
TRAM1-204ENST00000521049 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 A0A1W2PS18 150 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 K7EQG2 157 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 GPR31O00270 319 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 NPPCP23582 126 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 RFX2P48378 723 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
TRAM1-204ENST00000521049 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 KCTD21Q4G0X4 260 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 CSNK1G2-AS1Q8NCQ2 148 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 FCGR1BQ92637 280 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
TRAM1-204ENST00000521049 TBC1D24Q9ULP9 559 aa11.84□□□□□ -0.51
TRAM1-204ENST00000521049 PUS1Q9Y606 427 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAM1-204ENST00000521049 TMEM50AO95807 157 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 C4BPBP20851 252 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 PSMB9P28065 219 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
TRAM1-204ENST00000521049 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
TRAM1-204ENST00000521049 MEIS3P1A6NDR6 274 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 M0R2N4 97 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 CLEC2LP0C7M8 214 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 IDNKQ5T6J7 187 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 H2BFWTQ7Z2G1 175 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 OR6F1Q8NGZ6 308 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
TRAM1-204ENST00000521049 A0A1B0GU03 582 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 TMEM127O75204 238 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 NAT1P18440 290 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 NPY1RP25929 384 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 MXD1Q05195 221 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 STXBP6Q8NFX7 210 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 ANAPC10Q9UM13 185 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 CELA1Q9UNI1 258 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 PKD1P98161 4303 aa11.81□□□□□ -0.52
TRAM1-204ENST00000521049 PMP2P02689 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms