RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 NKX2-5P52952 324 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-209ENST00000520630 F2RL1P55085 397 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
CSMD1-209ENST00000520630 ID3Q02535 119 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 ZFP69Q49AA0 526 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 AARDQ4LEZ3 155 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 OR4A47Q6IF82 309 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 SSX9Q7RTT3 188 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 DMBX1Q8NFW5 382 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 OR1S1Q8NH92 325 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 RNASE11Q8TAA1 199 aaKnown RBP6.06□□□□□ -1.44
CSMD1-209ENST00000520630 FLYWCH2Q96CP2 140 aaKnown RBP6.06□□□□□ -1.44
CSMD1-209ENST00000520630 RHOVQ96L33 236 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 GON7Q9BXV9 100 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 TMEM140Q9NV12 185 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 COA4Q9NYJ1 87 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 BET1LQ9NYM9 111 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 OR5AC2Q9NZP5 309 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 ZNF580Q9UK33 172 aa6.06□□□□□ -1.44
CSMD1-209ENST00000520630 RCL1Q9Y2P8 373 aaKnown RBP6.06□□□□□ -1.44
CSMD1-209ENST00000520630 HMSDA8MTL9 139 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 NKX2-1P43699 371 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 LGALS7P47929 136 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 EIF2B2P49770 351 aaKnown RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 RAB9AP51151 201 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PAX9P55771 341 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 UBE2KP61086 200 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 ERVK-16P61578 105 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRR20EP86478 221 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRR20CP86479 221 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRR20DP86480 221 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRR20BP86481 221 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRR20AP86496 221 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 FGL1Q08830 312 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PSG5Q15238 335 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 LRRC37A5PQ49AS3 106 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 C19orf54Q5BKX5 351 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 THOC7Q6I9Y2 204 aaKnown RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 LAMTOR1Q6IAA8 161 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 PRSS54Q6PEW0 395 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 TMEM65Q6PI78 240 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 IL34Q6ZMJ4 242 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 GRPEL2Q8TAA5 225 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 HYLS1Q96M11 299 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 HARBI1Q96MB7 349 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 RNF5Q99942 180 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 QTRT1Q9BXR0 403 aaKnown RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 MBD2Q9UBB5 411 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 NSG2Q9Y328 171 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 LSM5Q9Y4Y9 91 aaKnown RBP6.05□□□□□ -1.44
CSMD1-209ENST00000520630 WSB1Q9Y6I7 421 aa6.05□□□□□ -1.44
CSMD1-209ENST00000520630 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 RNF222A6NCQ9 220 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 IZUMO1RA6ND01 250 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 C15orf61A6NNL5 157 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 FAM90A26D6RGX4 464 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 ST8SIA3O43173 380 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 KBTBD11O94819 623 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 NXPH3O95157 252 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 NDUFA3O95167 84 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 TMEM50AO95807 157 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 SCGB1D2O95969 90 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 MOSP00540 346 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 MYOD1P15172 320 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 CXCL2P19875 107 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 OR2B8PP59922 312 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 S100A10P60903 97 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 LGALSLQ3ZCW2 172 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-209ENST00000520630 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 TEX45Q8NA69 505 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 NPBQ8NG41 125 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 OR2T10Q8NGZ9 312 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 OR4A16Q8NH70 328 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 OR4A5Q8NH83 315 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 TSNAXQ99598 290 aaKnown RBP6.04□□□□□ -1.44
CSMD1-209ENST00000520630 AIFM2Q9BRQ8 373 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 MAGT1Q9H0U3 335 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 RBKSQ9H477 322 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 HSPB7Q9UBY9 170 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 TNFSF18Q9UNG2 199 aa6.04□□□□□ -1.44
CSMD1-209ENST00000520630 FOXA2Q9Y261 457 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-209ENST00000520630 FXYD6-FXYD2A0A087WZ82 144 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 TEX50A0A1B0GTY4 177 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 MSGN1A6NI15 193 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 CGB1A6NKQ9 187 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 LINC01619G3V211 115 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 RRHO14718 337 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 SYNGR2O43760 224 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 SPDEFO95238 335 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 MED14OSP0DP75 135 aa6.03□□□□□ -1.44
CSMD1-209ENST00000520630 HSPE1P61604 102 aaKnown RBP6.03□□□□□ -1.44
CSMD1-209ENST00000520630 SSBP2P81877 361 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms