RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 IL36BQ9NZH7 164 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 BAIAP2Q9UQB8 552 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 NBEAQ8NFP9 2946 aa0.84□□□□□ -2.28
SKP1-203ENST00000517625 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.28
SKP1-203ENST00000517625 TONSLQ96HA7 1378 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 UTRNP46939 3433 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 CELSR2Q9HCU4 2923 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 TRBV20OR9-2A0A075B6H5 130 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 GGT3PA6NGU5 568 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 EVPLLA8MZ36 301 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 DEFA4P12838 97 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 REG1BP48304 166 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 PMAIP1Q13794 54 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 GRK1Q15835 563 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 CCDC122Q5T0U0 273 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 FAM173BQ6P4H8 233 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 RASSF5Q8WWW0 418 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 EVC2Q86UK5 1308 aa0.83□□□□□ -2.28
SKP1-203ENST00000517625 SIPA1L1O43166 1804 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 CNOT1A5YKK6 2376 aaKnown RBP0.82□□□□□ -2.28
SKP1-203ENST00000517625 FUOMA2VDF0 154 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 TRAPPC2LH3BP13 241 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 M0R036 132 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 TGOLN2O43493 480 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 PMP2P02689 132 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 CALB1P05937 261 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 ZNF345Q14585 488 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 GUK1Q16774 197 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 RPL22L1Q6P5R6 122 aaKnown RBP0.82□□□□□ -2.28
SKP1-203ENST00000517625 DEFB128Q7Z7B8 93 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 C20orf196Q8IYI0 205 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 Q8N2B8 174 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 LRRC25Q8N386 305 aaPredicted RBP0.82□□□□□ -2.28
SKP1-203ENST00000517625 C12orf29Q8N999 325 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 OR13C4Q8NGS5 318 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 MCFD2Q8NI22 146 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 IMP4Q96G21 291 aaKnown RBP0.82□□□□□ -2.28
SKP1-203ENST00000517625 OR51I1Q9H343 314 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 CEP290O15078 2479 aa0.82□□□□□ -2.28
SKP1-203ENST00000517625 ZFHX3Q15911 3703 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 WDR90Q96KV7 1748 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 A0A0J9YY10 115 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 A0A1B0GX78 115 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 SMIM23A6NLE4 172 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 EEF1E1-BLOC1S5C9J1V9 151 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 INMT-MINDY4F8WBC2 141 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 AHSA1O95433 338 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 SHBGP04278 402 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H1EP10412 219 aaKnown RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 RPS4Y1P22090 263 aaKnown RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 TCL1AP56279 114 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 KRTAP10-4P60372 401 aaPredicted RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 PSME3P61289 254 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 PLCXD2Q0VAA5 305 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 CDK5R1Q15078 307 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 CDKL4Q5MAI5 379 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 SPANXN3Q5MJ09 141 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 Q6ZS49 121 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 MRPL30Q8TCC3 161 aaKnown RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 SLC35B4Q969S0 331 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 TMEM106AQ96A25 262 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 WDR61Q9GZS3 305 aaKnown RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 XPNPEP1Q9NQW7 623 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 SNURFQ9Y675 71 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 DCHS1Q96JQ0 3298 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 TLN2Q9Y4G6 2542 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 RNF213Q63HN8 5207 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 PRRC2CQ9Y520 2896 aaKnown RBP0.81□□□□□ -2.28
SKP1-203ENST00000517625 OTOGQ6ZRI0 2925 aa0.81□□□□□ -2.28
SKP1-203ENST00000517625 KIAA2026Q5HYC2 2103 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 NAV1Q8NEY1 1877 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 GOLGA6L19H0YKK7 550 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HTR1AP08908 422 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BOP23527 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BBP33778 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 NKX2-5P52952 324 aaPredicted RBP0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BDP58876 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BCP62807 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 OR2F1Q13607 317 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST2H2BEQ16778 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.8□□□□□ -2.28
SKP1-203ENST00000517625 C10orf55Q5SWW7 151 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST2H3PS2Q5TEC6 136 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 ALKAL1Q6UXT8 129 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 AAED1Q7RTV5 226 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 IQCF2Q8IXL9 164 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 OTUD6BQ8N6M0 293 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 OR4D11Q8NGI4 311 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 DDI1Q8WTU0 396 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BHQ93079 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 SERPINI1Q99574 410 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BNQ99877 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HIST1H2BMQ99879 126 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 DERL1Q9BUN8 251 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 COMMD5Q9GZQ3 224 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 MIXL1Q9H2W2 232 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 PRTFDC1Q9NRG1 225 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms