RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 PRB3Q04118 309 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 CDK10Q15131 360 aa1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 ZNF826PQ6ZT77 177 aa1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 CLVS1Q8IUQ0 354 aaPredicted RBP1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 OR13C4Q8NGS5 318 aa1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 C11orf68Q9H3H3 251 aaKnown RBP1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 C22orf24Q9Y442 160 aa1.04□□□□□ -2.24
RNU6-1028P-201ENST00000517164 PSMD12O00232 456 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 FAAHO00519 579 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 GEMIN2O14893 280 aaKnown RBP1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 SNRPD2P62316 118 aaKnown RBP1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 KCNJ8Q15842 424 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 CCDC122Q5T0U0 273 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 TEX36Q5VZQ5 186 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 C20orf196Q8IYI0 205 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 LINC00471Q8N535 108 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 TERB2Q8NHR7 220 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 IMP4Q96G21 291 aaKnown RBP1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 OR52E6Q96RD3 313 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 NIPSNAP1Q9BPW8 284 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 GINS4Q9BRT9 223 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 SLC50A1Q9BRV3 221 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 PRTFDC1Q9NRG1 225 aa1.03□□□□□ -2.24
RNU6-1028P-201ENST00000517164 FUOMA2VDF0 154 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 FADS1O60427 444 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 AHSA1O95433 338 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 CD79AP11912 226 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SPI1P17947 270 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 COL4A5P29400 1685 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DEFA1P59665 94 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 RPS20P60866 119 aaKnown RBP1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SNAPC4Q5SXM2 1469 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 FAM19A2Q8N3H0 131 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR4D11Q8NGI4 311 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DNAJC9Q8WXX5 260 aa1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 PARD6GQ9BYG4 376 aaPredicted RBP1.02□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TOPBP1Q92547 1522 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 WRNQ14191 1432 aaPredicted RBP eCLIP1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 MTUS2Q5JR59 1369 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 M0R036 132 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 RPL5P46777 297 aaKnown RBP1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SULT1A1P50225 295 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 PSME3P61289 254 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ACOT6Q3I5F7 207 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 MIR17HGQ75NE6 70 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DEFB128Q7Z7B8 93 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ANKRD29Q8N6D5 301 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR4C6Q8NH72 309 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 H1FXQ92522 213 aaKnown RBP1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 COMMD5Q9GZQ3 224 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 EML6Q6ZMW3 1958 aa1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TNRC6BQ9UPQ9 1833 aaKnown RBP1.01□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DPRXA6NFQ7 191 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 CHP2O43745 196 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 IFNA16P05015 189 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ASAH2BP0C7U1 165 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 LPCAT3Q6P1A2 487 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DPPA3Q6W0C5 159 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OTUD6BQ8N6M0 293 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TOMM6Q96B49 74 aa1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 MRPL27Q9P0M9 148 aaKnown RBP1□□□□□ -2.25
RNU6-1028P-201ENST00000517164 A0A0D9SG52 128 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 EXOC1LA0A1B0GW35 172 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 BUB1B-PAK6H3BSN5 160 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 BRS3P32247 399 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 IMPG1Q17R60 797 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 KHDC3LQ587J8 217 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR4E2Q8NGC2 313 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR5A1Q8NGJ0 315 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TMEM56-RWDD3S4R434 201 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 HECW1Q76N89 1606 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 HECW2Q9P2P5 1572 aa0.99□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TRAV9-1A0A075B6T8 112 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR4C46A6NHA9 309 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 C2orf70A6NJV1 201 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 NIPSNAP2O75323 286 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 IFNA10P01566 189 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DEFB115Q30KQ5 88 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SPOPLQ6IQ16 392 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 PHF13Q86YI8 300 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 LINC00311Q8N616 119 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TSPAN32Q96QS1 320 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SLC39A9Q9NUM3 307 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 VPS29Q9UBQ0 182 aa0.98□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ADCY9O60503 1353 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 NUP155O75694 1391 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 A0A087WX48 190 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TRAV1-1A0A0B4J248 108 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ZNF93P35789 620 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 CDC42P60953 191 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 RHEBQ15382 184 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 PTRHD1Q6GMV3 140 aaKnown RBP0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 SIGLECL1Q8N7X8 197 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 OR52R1Q8NGF1 315 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 DCUN1D1Q96GG9 259 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ARL5BQ96KC2 179 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ULBP3Q9BZM4 244 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 ERGIC3Q9Y282 383 aa0.97□□□□□ -2.25
RNU6-1028P-201ENST00000517164 TRAV26-2A0A0B4J265 109 aa0.96□□□□□ -2.26
RNU6-1028P-201ENST00000517164 PQLC2LA1A4F0 135 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms