RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SSBP1Q04837 148 aaKnown RBP10.21□□□□□ -0.77
TCOF1-215ENST00000515516 MEF2DQ14814 521 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 IZUMO4Q1ZYL8 232 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 SPINK9Q5DT21 86 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 DUSP18Q8NEJ0 188 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 TP53RKQ96S44 253 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 UBQLN2Q9UHD9 624 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 C14orf166Q9Y224 244 aaKnown RBP10.21□□□□□ -0.77
TCOF1-215ENST00000515516 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 DISC1C4P0D8 188 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 IGKV1-5P01602 117 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 CD74P04233 296 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 FCGR2BP31994 310 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 BMI1P35226 326 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 ALDH3B2P48448 385 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 HOXA1P49639 335 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 SP6Q3SY56 376 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 CLVS1Q8IUQ0 354 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 OR4D10Q8NGI6 311 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 OR13C8Q8NGS7 320 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 MARCH1Q8TCQ1 289 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 RABL2AQ9UBK7 228 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-215ENST00000515516 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 RABL2BQ9UNT1 228 aa10.2□□□□□ -0.78
TCOF1-215ENST00000515516 A0A0B4J293 547 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 TEX13DA0A0J9YY54 714 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-215ENST00000515516 LCE6AA0A183 80 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 CORTO00230 105 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 CTDSP2O14595 271 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 ST8SIA3O43173 380 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 NOL3O60936 208 aaKnown RBP10.19□□□□□ -0.78
TCOF1-215ENST00000515516 SCGB2A1O75556 95 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 IGHV3-48P01763 117 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 IL18Q14116 193 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 SPCS2Q15005 226 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 RAB2BQ8WUD1 216 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 DIRAS2Q96HU8 199 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 GINS3Q9BRX5 216 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 RHPN1-AS1Q9BWJ2 59 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 C6orf62Q9GZU0 229 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-215ENST00000515516 NXF2Q9GZY0 626 aaKnown RBP10.19□□□□□ -0.78
TCOF1-215ENST00000515516 MIXL1Q9H2W2 232 aa10.19□□□□□ -0.78
TCOF1-215ENST00000515516 UBE2CO00762 179 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 CHEK1O14757 476 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 AKAIN1P0CW23 69 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 UCP1P25874 307 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 ETV6P41212 452 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 OR10C1Q96KK4 312 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 RNF2Q99496 336 aa10.18□□□□□ -0.78
TCOF1-215ENST00000515516 RYR3Q15413 4870 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 INS-IGF2F8WCM5 200 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 JTBO76095 146 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 CD5P06127 495 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 P0C879 139 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 TFPI2P48307 235 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 TMBIM6P55061 237 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 DHODHQ02127 395 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 SURF2Q15527 256 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-215ENST00000515516 FAM219AQ8IW50 185 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 SMIM4Q8WVI0 70 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 BCL7BQ9BQE9 202 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 NAA60Q9H7X0 242 aa10.17□□□□□ -0.78
TCOF1-215ENST00000515516 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-215ENST00000515516 CCDC59Q9P031 241 aaKnown RBP10.17□□□□□ -0.78
TCOF1-215ENST00000515516 IGKV3-7A0A075B6H7 116 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 CTDSPLO15194 276 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 SPRY2O43597 315 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 OR5AC1P0C628 307 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
TCOF1-215ENST00000515516 OPRK1P41145 380 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 SPCS3P61009 180 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 FAAP20Q6NZ36 180 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 TOMM20LQ6UXN7 152 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 Q6ZWC4 215 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 KIR2DL5BQ8NHK3 375 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 GALNT14Q96FL9 552 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 SCGB3A2Q96PL1 93 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 PRRT1Q99946 306 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 TMEM222Q9H0R3 208 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 RSL24D1Q9UHA3 163 aaKnown RBP10.16□□□□□ -0.78
TCOF1-215ENST00000515516 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
TCOF1-215ENST00000515516 IGHV3OR16-13A0A075B7E8 117 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 IGHV3-74A0A0B4J1X5 117 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 DNASE2O00115 360 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-215ENST00000515516 CDS2O95674 445 aa10.15□□□□□ -0.78
TCOF1-215ENST00000515516 RNASE2P10153 161 aaKnown RBP10.15□□□□□ -0.78
TCOF1-215ENST00000515516 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms