RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RAB3DO95716 219 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 MT-CO2P00403 227 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 CTSDP07339 412 aaPredicted RBP7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 UCP1P25874 307 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 AKR1C2P52895 323 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 MEF2DQ14814 521 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 SCGB2B2Q4G0G5 96 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 SPINK9Q5DT21 86 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 PVRIGQ6DKI7 326 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 LAMTOR1Q6IAA8 161 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 CLVS1Q8IUQ0 354 aaPredicted RBP7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 CCDC71LQ8N9Z2 235 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 DYNC2LI1Q8TCX1 351 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 OR10C1Q96KK4 312 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 C20orf24Q9BUV8 137 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 COPZ2Q9P299 210 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 A0A0G2JRQ6 117 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 CTDSPLO15194 276 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 NUPL2O15504 423 aaKnown RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 MFAP4P55083 255 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 ERHP84090 104 aaKnown RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 SURF2Q15527 256 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 TRIM16LQ309B1 348 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 SP6Q3SY56 376 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 AARDQ4LEZ3 155 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 SLC35G3Q8N808 338 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 NXF2Q9GZY0 626 aaKnown RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 RABL2AQ9UBK7 228 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 SMPXQ9UHP9 88 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 RABL2BQ9UNT1 228 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
HMGXB3-205ENST00000514469 OR4C46A6NHA9 309 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 CHEK1O14757 476 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 GNG7O60262 68 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 RNASE2P10153 161 aaKnown RBP7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 TMBIM6P55061 237 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 OR4C16Q8NGL9 310 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 IL17DQ8TAD2 202 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 PINX1Q96BK5 328 aaKnown RBP7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 RNF2Q99496 336 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 OVOL2Q9BRP0 275 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 RTBDNQ9BSG5 229 aaPredicted RBP7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 NAA60Q9H7X0 242 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 UBQLN2Q9UHD9 624 aa7.77□□□□□ -1.17
HMGXB3-205ENST00000514469 DISC1C4P0D8 188 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 CORTO00230 105 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 GSTZ1O43708 216 aaPredicted RBP7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 CDS2O95674 445 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 IFNA17P01571 189 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 OR5AC1P0C628 307 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 AKAIN1P0CW23 69 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 SNCAP37840 140 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 NPBWR1P48145 328 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 HOXA1P49639 335 aaPredicted RBP7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 IL18Q14116 193 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 BSXQ3C1V8 233 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 Q6ZRM9 215 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM116Q8NCL8 245 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 LHFPL5Q8TAF8 219 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 RRNAD1Q96FB5 475 aaKnown RBP7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 DIRAS2Q96HU8 199 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 SLIRPQ9GZT3 109 aaKnown RBP7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 ZFAND3Q9H8U3 227 aa7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 C14orf166Q9Y224 244 aaKnown RBP7.76□□□□□ -1.17
HMGXB3-205ENST00000514469 TRAV14DV4A0A0A6YYC5 116 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 TEX13DA0A0J9YY54 714 aaPredicted RBP7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 ANKRD20A5PA0PJZ0 165 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 CRYM-AS1A6NIL9 109 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 H3BMQ9 156 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 YIF1AO95070 293 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 ETV6P41212 452 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 SUB1P53999 127 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 APOC4P55056 127 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 DHODHQ02127 395 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 FAM90A2PQ658T7 463 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 TOMM20LQ6UXN7 152 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 ZNF600Q6ZNG1 722 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 DUSP18Q8NEJ0 188 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 OR52E5Q8NH55 327 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 RNASE11Q8TAA1 199 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 RBPMSQ93062 196 aaKnown RBP7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 PRRT1Q99946 306 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 C6orf62Q9GZU0 229 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms