RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ACOT6Q3I5F7 207 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 Q6ZS49 121 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 LINC00471Q8N535 108 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR51D1Q8NGF3 324 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR2T4Q8NH00 348 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 MRPL30Q8TCC3 161 aaKnown RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 WDR61Q9GZS3 305 aaKnown RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 UCK1Q9HA47 277 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 PRTFDC1Q9NRG1 225 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 IL36BQ9NZH7 164 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 RALGAPA2Q2PPJ7 1873 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 NCOA6Q14686 2063 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 PQLC2LA1A4F0 135 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 CLDN24A6NM45 220 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 RPP14O95059 124 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 HLA-DRB1P01911 266 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 S100A6P06703 90 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 MYL6P60660 151 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 SNRPD2P62316 118 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 STX5Q13190 355 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 ZNF846Q147U1 533 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 AADACL3Q5VUY0 350 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 SPOPLQ6IQ16 392 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 RPL22L1Q6P5R6 122 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 AAED1Q7RTV5 226 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 TRAPPC5Q8IUR0 188 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 CLDN22Q8N7P3 220 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 WFDC11Q8NEX6 87 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR13C4Q8NGS5 318 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 RASSF5Q8WWW0 418 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 C11orf40Q8WZ69 217 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 DCUN1D1Q96GG9 259 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 CCDC42Q96M95 316 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 PPP1R2P1Q96PQ5 205 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 NIPSNAP1Q9BPW8 284 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 DERL1Q9BUN8 251 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 COMMD5Q9GZQ3 224 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 FBXL12Q9NXK8 326 aa0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 MRPL27Q9P0M9 148 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-210ENST00000513600 TTC21AQ8NDW8 1320 aa0.59□□□□□ -2.32
TRAPPC11-210ENST00000513600 NUP155O75694 1391 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 WRNQ14191 1432 aaPredicted RBP eCLIP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 FAAHO00519 579 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 IFNA10P01566 189 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 IGKV1-5P01602 117 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 TTRP02766 147 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 TCRBP04435 133 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 RPS17P08708 135 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 RPS4Y1P22090 263 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BOP23527 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BBP33778 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 CDKN2CP42773 168 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 RPL5P46777 297 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BDP58876 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 LSM6P62312 80 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BCP62807 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 SUPT4H1P63272 117 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HBA1P69905 142 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 AESQ08117 197 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 EDDM3AQ14507 147 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST2H2BEQ16778 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 IAH1Q2TAA2 248 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 SPANXN3Q5MJ09 141 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 LPCAT3Q6P1A2 487 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 ANKRD29Q8N6D5 301 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 MCFD2Q8NI22 146 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 KLK6Q92876 244 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BHQ93079 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 BORCS7Q96B45 105 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 TOMM6Q96B49 74 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 C8orf76Q96K31 380 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 TSPAN32Q96QS1 320 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BNQ99877 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H2BMQ99879 126 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 ULBP3Q9BZM4 244 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 C20orf27Q9GZN8 174 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR51V1Q9H2C8 321 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 CMTM6Q9NX76 183 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 UBAP1Q9NZ09 502 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 SLC22A13Q9Y226 551 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM56-RWDD3S4R434 201 aa0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 V9GYY5 206 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC11-210ENST00000513600 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 MED12Q93074 2177 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 DOCK5Q9H7D0 1870 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 TRAV9-1A0A075B6T8 112 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 A0A087WUJ7 227 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 TRAV26-2A0A0B4J265 109 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 DPRXA6NFQ7 191 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR4C46A6NHA9 309 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 C19orf84I3L1E1 186 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 LYPLA2O95372 231 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 HAND1O96004 215 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 ANP32AP39687 249 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 RANP62826 216 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST1H3AP68431 136 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 CCL7P80098 99 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 H3F3AP84243 136 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms