RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CORTO00230 105 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 MED6O75586 246 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 IGHV3-11P01762 117 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 HOXA1P49639 335 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 OXA1LQ15070 435 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 EEF1AKMT3Q96AZ1 226 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 HIPK2Q9H2X6 1198 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 ENY2Q9NPA8 101 aa11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 HEYLQ9NQ87 328 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-218ENST00000513506 IGHV4OR15-8A0A075B7B6 117 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 A0A087WW49 117 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 MFSD2BA6NFX1 497 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 CEBPZOSA8MTT3 80 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 F8W735 103 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 WIPF1O43516 503 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 SYNGR2O43760 224 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 ZP3P21754 424 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 EXOSC2Q13868 293 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 RGS21Q2M5E4 152 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 TXN2Q99757 166 aa11.94□□□□□ -0.5
POLR2J3-218ENST00000513506 BMPR1BO00238 502 aa11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 PF4P02776 101 aa11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 C2orf50Q96LR7 162 aa11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
POLR2J3-218ENST00000513506 MEGF8Q7Z7M0 2845 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 TAS2R30P59541 319 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 DEFA5Q01523 94 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 TATDN3Q17R31 274 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 SPSB3Q6PJ21 355 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 GPHB5Q86YW7 130 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 DPF1Q92782 380 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
POLR2J3-218ENST00000513506 MT-CO2P00403 227 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 CLEC3BP05452 202 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 NPY1RP25929 384 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 DUX3Q96PT4 197 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-218ENST00000513506 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 LGALS9O00182 355 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 GGCTO75223 188 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 TMEM50AO95807 157 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 MFAP4P55083 255 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 PAX9P55771 341 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 GSG1LQ6UXU4 331 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 TMEM116Q8NCL8 245 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 DNAH3Q8TD57 4116 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 DLX4Q92988 240 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 SIGLEC8Q9NYZ4 499 aa11.9□□□□□ -0.5
POLR2J3-218ENST00000513506 ANKRD34BA5PLL1 514 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 CCSO14618 274 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 CTSGP08311 255 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 SLC25A4P12235 298 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 KPRPQ5T749 579 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 DCUN1D4Q92564 292 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 ZNF414Q96IQ9 312 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 NMES1Q9C002 83 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 ZNF436Q9C0F3 470 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-218ENST00000513506 RPS10-NUDT3A0A1W2PQS6 291 aa11.88□□□□□ -0.51
POLR2J3-218ENST00000513506 TGOLN2O43493 480 aa11.88□□□□□ -0.51
POLR2J3-218ENST00000513506 TSC22D2O75157 780 aa11.88□□□□□ -0.51
POLR2J3-218ENST00000513506 NXPH3O95157 252 aa11.88□□□□□ -0.51
POLR2J3-218ENST00000513506 IFNA10P01566 189 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms