RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PRELID3BQ9Y3B1 194 aa10.26□□□□□ -0.77
SPCS3-204ENST00000513139 TSPAN4O14817 238 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 CTRB1P17538 263 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 PSMB6P28072 239 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
SPCS3-204ENST00000513139 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 TBC1D26Q86UD7 250 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 SPAG16Q8N0X2 631 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 ZFAND1Q8TCF1 268 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 BORCS5Q969J3 196 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 EEF1AKMT3Q96AZ1 226 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 SLC2A9Q9NRM0 540 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 GPR132Q9UNW8 380 aa10.25□□□□□ -0.77
SPCS3-204ENST00000513139 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 UPK1BO75841 260 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 DHFRP00374 187 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 CTSDP07339 412 aaPredicted RBP10.24□□□□□ -0.77
SPCS3-204ENST00000513139 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
SPCS3-204ENST00000513139 MYOD1P15172 320 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 BTCP35070 178 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 PIGPP57054 158 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 ZNF585BQ52M93 769 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 C10orf55Q5SWW7 151 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 VKORC1L1Q8N0U8 176 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 DEDD2Q8WXF8 326 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 FBXL17Q9UF56 701 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 UBQLN2Q9UHD9 624 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
SPCS3-204ENST00000513139 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 NAP1L6A6NFF2 107 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 CENPXA8MT69 81 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 FAM229AH3BQW9 127 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 IGHV3-23P01764 117 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 CRYGCP07315 174 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 HIST1H1BP16401 226 aaKnown RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 RPL35AP18077 110 aaKnown RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 F2RP25116 425 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 LPAR6P43657 344 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 RND3P61587 244 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 CATR1Q13166 79 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 SURF2Q15527 256 aaPredicted RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 UNQ9165/PRO28630Q6UXU0 137 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 ZNF486Q96H40 463 aaPredicted RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 FYTTD1Q96QD9 318 aaKnown RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 RARRES2Q99969 163 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 COPZ2Q9P299 210 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 TBC1D24Q9ULP9 559 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 C14orf166Q9Y224 244 aaKnown RBP10.23□□□□□ -0.77
SPCS3-204ENST00000513139 PKD1P98161 4303 aa10.23□□□□□ -0.77
SPCS3-204ENST00000513139 HMX3A6NHT5 357 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 LYRM1O43325 122 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 S1PR2O95136 353 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 CLEC3BP05452 202 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 RPA2P15927 270 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 S100GP29377 79 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
SPCS3-204ENST00000513139 SP6Q3SY56 376 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 LAMTOR1Q6IAA8 161 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 OR4S2Q8NH73 311 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 CXorf58Q96LI9 332 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 C7orf50Q9BRJ6 194 aaKnown RBP10.22□□□□□ -0.77
SPCS3-204ENST00000513139 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 FLVCR2Q9UPI3 526 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 S4R3C0 116 aa10.22□□□□□ -0.77
SPCS3-204ENST00000513139 OR4C46A6NHA9 309 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.77
SPCS3-204ENST00000513139 IL6RP08887 468 aaPredicted RBP10.21□□□□□ -0.77
SPCS3-204ENST00000513139 AKR1C4P17516 323 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 ADMP35318 185 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 MAS1LP35410 378 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 MFAP2P55001 183 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 SSX9Q7RTT3 188 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 CCDC71LQ8N9Z2 235 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 SCGB3A2Q96PL1 93 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 TP53RKQ96S44 253 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 TSC22D3Q99576 134 aa10.21□□□□□ -0.77
SPCS3-204ENST00000513139 SLC25A21Q9BQT8 299 aaPredicted RBP10.21□□□□□ -0.77
SPCS3-204ENST00000513139 ABCA13Q86UQ4 5058 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 TEX13DA0A0J9YY54 714 aaPredicted RBP10.2□□□□□ -0.78
SPCS3-204ENST00000513139 C3orf85A0A1B0GTC6 90 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 IGLL5B9A064 214 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 E7EUB6 86 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 NDUFB6O95139 128 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 HPRT1P00492 218 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 IGKV1-39P01597 117 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 IGKV1D-39P04432 117 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 RPL27AP46776 148 aaKnown RBP10.2□□□□□ -0.78
SPCS3-204ENST00000513139 ASAH1Q13510 395 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 C19orf35Q6ZS72 473 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 OR11H2Q8NH07 326 aa10.2□□□□□ -0.78
SPCS3-204ENST00000513139 VSTM2AQ8TAG5 236 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms