RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	TERB2	Q8NHR7	220 aa		9.29	□□□□□ -0.92
UBE2D3-231	ENST00000513098	RNF183	Q96D59	192 aa		9.29	□□□□□ -0.92
UBE2D3-231	ENST00000513098	ABHD1	Q96SE0	405 aa		9.29	□□□□□ -0.92
UBE2D3-231	ENST00000513098	RNF2	Q99496	336 aa		9.29	□□□□□ -0.92
UBE2D3-231	ENST00000513098	RHPN1-AS1	Q9BWJ2	59 aa		9.29	□□□□□ -0.92
UBE2D3-231	ENST00000513098		M0QYG6	137 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	ATG12	O94817	140 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	IGKV1-5	P01602	117 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	CD74	P04233	296 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	CD3D	P04234	171 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	PIGP	P57054	158 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	SSBP1	Q04837	148 aa	Known RBP	9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	AARD	Q4LEZ3	155 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	RNASE10	Q5GAN6	216 aa	Known RBP	9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	OR52I2	Q8NH67	350 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	ZFAND1	Q8TCF1	268 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	MISP3	Q96FF7	219 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	MAP6D1	Q9H9H5	199 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	UBQLN2	Q9UHD9	624 aa		9.28	□□□□□ -0.92
UBE2D3-231	ENST00000513098	IGHV3OR16-8	A0A075B7F1	116 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	C3orf85	A0A1B0GTC6	90 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	FAM25A	B3EWG3	89 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	FAM25C	B3EWG5	89 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	FAM25G	B3EWG6	89 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ZNF207	O43670	478 aa	Known RBP	9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RPL5	P46777	297 aa	Known RBP	9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	NPBWR1	P48145	328 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TOMM20L	Q6UXN7	152 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TMEM229B	Q8NBD8	167 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	DUSP18	Q8NEJ0	188 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TP53RK	Q96S44	253 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	NAA50	Q9GZZ1	169 aa	Known RBP	9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098	VSIR	Q9H7M9	311 aa		9.27	□□□□□ -0.93
UBE2D3-231	ENST00000513098		A0A0J9YWU9	116 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CORT	O00230	105 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ST8SIA3	O43173	380 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	GNG7	O60262	68 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	YIF1A	O95070	293 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TMEM50A	O95807	157 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SMIM18	P0DKX4	95 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	PGAM2	P15259	253 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	PI3	P19957	117 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	UCP1	P25874	307 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SNCA	P37840	140 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SUB1	P53999	127 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TAS2R19	P59542	299 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	GPR107	Q5VW38	600 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	LYG2	Q86SG7	212 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	GINS3	Q9BRX5	216 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	C6orf62	Q9GZU0	229 aa	Predicted RBP	9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	EXTL2	Q9UBQ6	330 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	FRAS1	Q86XX4	4008 aa		9.26	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TRAV2	A0A0B4J234	112 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	GABARAP	H6UMI1	98 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CDS2	O95674	445 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	PAFAH1B2	P68402	229 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	MRPS10	P82664	201 aa	Known RBP	9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	IZUMO4	Q1ZYL8	232 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	DEFB135	Q30KP9	77 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	BSX	Q3C1V8	233 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ZNF600	Q6ZNG1	722 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	FAM219A	Q8IW50	185 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CCDC71L	Q8N9Z2	235 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	OR4D10	Q8NGI6	311 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	OR52E5	Q8NH55	327 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	GATAD1	Q8WUU5	269 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CSTL1	Q9H114	145 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	COPZ2	Q9P299	210 aa		9.25	□□□□□ -0.93
UBE2D3-231	ENST00000513098	NUPR2	A6NF83	97 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	DFFB	O76075	338 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	IFNA17	P01571	189 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	IGHV3-48	P01763	117 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RNASE2	P10153	161 aa	Known RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ETV6	P41212	452 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	AKR1C2	P52895	323 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	EWSR1	Q01844	656 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SURF2	Q15527	256 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	STEAP1B	Q6NZ63	245 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CEMP1	Q6PRD7	247 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	APRG1	Q8IVJ8	170 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	LILRB2	Q8N423	598 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TMEM217	Q8N7C4	229 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	OR13C8	Q8NGS7	320 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	OR4X1	Q8NH49	305 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	PINX1	Q96BK5	328 aa	Known RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RRNAD1	Q96FB5	475 aa	Known RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	TMEM222	Q9H0R3	208 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	MIXL1	Q9H2W2	232 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ZFAND3	Q9H8U3	227 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RABL2A	Q9UBK7	228 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RABL2B	Q9UNT1	228 aa		9.24	□□□□□ -0.93
UBE2D3-231	ENST00000513098	MPTX1	A8MV57	137 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	CLN5	O75503	358 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RAB3D	O95716	219 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	RPL35A	P18077	110 aa	Known RBP	9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	ALDH3B2	P48448	385 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SPCS3	P61009	180 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	MEF2D	Q14814	521 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098	SP6	Q3SY56	376 aa		9.23	□□□□□ -0.93
UBE2D3-231	ENST00000513098		Q6ZRM9	215 aa		9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms