RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 CCL17Q92583 94 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 WASHC3Q9Y3C0 194 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 TRBV9A0A0B4J1U6 114 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 ACTL6BO94805 426 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 FSTL3O95633 263 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 LOXP28300 417 aaPredicted RBP7.48□□□□□ -1.21
CPNE4-210ENST00000512332 CHRNB4P30926 498 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 LGALS7P47929 136 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 GNG4P50150 75 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 ZNF90Q03938 601 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 MLANAQ16655 118 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 TMEM155Q4W5P6 130 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 C9orf152Q5JTZ5 239 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 PVRIGQ6DKI7 326 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 TNFRSF14Q92956 283 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 DNAJC4Q9NNZ3 241 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
CPNE4-210ENST00000512332 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 CGB1A6NKQ9 187 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 SHISA9B4DS77 424 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 CRYBB3P26998 211 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 LGALS4P56470 323 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 RPL19P84098 196 aaKnown RBP7.47□□□□□ -1.21
CPNE4-210ENST00000512332 WT1-ASQ06250 92 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 LYPD2Q6UXB3 125 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 THAP8Q8NA92 274 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 FAM122AQ96E09 287 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 FAM167A-AS1Q96KT0 104 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 WFIKKN1Q96NZ8 548 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 CTSZQ9UBR2 303 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 V9GYV3 84 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ASPMQ8IZT6 3477 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 RIF1Q5UIP0 2472 aaKnown RBP7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ZGRF1Q86YA3 2104 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 E7EUB6 86 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ISLRO14498 428 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 OR7C2O60412 319 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ESDP10768 282 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 GATA2P23769 480 aaPredicted RBP7.47□□□□□ -1.21
CPNE4-210ENST00000512332 DDTP30046 118 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 PPOXP50336 477 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ERVFC1-1P60608 527 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 PRSS8Q16651 343 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 RPEL1Q2QD12 228 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 TIGITQ495A1 244 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 COX19Q49B96 90 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 CENPWQ5EE01 88 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 TGIF2LXQ8IUE1 241 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 C11orf42Q8N5U0 333 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 OR1L4Q8NGR5 311 aa7.47□□□□□ -1.21
CPNE4-210ENST00000512332 H1FXQ92522 213 aaKnown RBP7.47□□□□□ -1.21
CPNE4-210ENST00000512332 ZNF430Q9H8G1 570 aaPredicted RBP7.47□□□□□ -1.21
CPNE4-210ENST00000512332 DMXL1Q9Y485 3027 aa7.46□□□□□ -1.21
CPNE4-210ENST00000512332 TCRBV4S1A1TA0A5B7 111 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 GGTLC3B5MD39 225 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 E7EQL1 145 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 RD3LP0DJH9 198 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 IGHV1-8P0DP01 117 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 APOBEC3AP31941 199 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 TAS2R60P59551 318 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 DMRTC2Q8IXT2 367 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 MMD2Q8IY49 270 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 OR2T6Q8NHC8 308 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 NOL4LQ96MY1 436 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 SLC25A2Q9BXI2 301 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 ZMAT5Q9UDW3 170 aaKnown RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 B9A039 149 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 SLC17A3O00476 420 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 REG1BP48304 166 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 SUMO1P63165 101 aaKnown RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 PAX2Q02962 417 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 RBPJQ06330 500 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 IQCJQ1A5X6 159 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 ETFRF1Q6IPR1 90 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 C14orf144Q96I85 54 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM133Q9H2Q1 129 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 FNDC4Q9H6D8 234 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-210ENST00000512332 DYNLRB1Q9NP97 96 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 CDC42EP3Q9UKI2 254 aa7.46□□□□□ -1.22
CPNE4-210ENST00000512332 CEP250Q9BV73 2442 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 MAP1BP46821 2468 aaKnown RBP7.45□□□□□ -1.22
CPNE4-210ENST00000512332 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 IGHV1-69-2A0A0G2JMI3 117 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 IGLV2-8P01709 118 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 MT-ND6P03923 174 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 CRYGCP07315 174 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 HNF1AP20823 631 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 COL8A2P25067 703 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 ADMP35318 185 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 PAFAH1B2P68402 229 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 CX3CL1P78423 397 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 DIAPH2-AS1Q14236 149 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 TBR1Q16650 682 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 MRGPRG-AS1Q2M3A8 158 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms