RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 MBD3L1Q8WWY6 194 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 OR5P3Q8WZ94 311 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 C1QTNF4Q9BXJ3 329 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 PLSCR2Q9NRY7 297 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 ANAPC10Q9UM13 185 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 LINC00312Q9Y6C7 94 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 KBTBD11-OT1A0A1B0GTJ5 212 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 CELA3AP09093 270 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 CD24P25063 80 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 ARTNQ5T4W7 220 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 TMEM105Q8N8V8 129 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 MRPL20Q9BYC9 149 aaKnown RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 SEPSECSQ9HD40 501 aaKnown RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 SIRT4Q9Y6E7 314 aaPredicted RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 A0A0U1RRA0 63 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 GCHFRP30047 84 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 PAX2Q02962 417 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 PRB3Q04118 309 aaPredicted RBP4.86□□□□□ -1.63
USP38-203ENST00000511739 FBLN7Q53RD9 439 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 NR2C2APQ86WQ0 139 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 WFDC12Q8WWY7 111 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 LINC00527Q9UJ94 153 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 CXorf65A6NEN9 183 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 LYNX1G3V0Z9 82 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 LYNX1P0DP58 116 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 FSTP19883 344 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 ZNF600Q6ZNG1 722 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 KLHL30-AS1Q8NEE0 82 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 ASCL2Q99929 193 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 NDUFA3O95167 84 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 EFNA4P52798 201 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 PAX8Q06710 450 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 OR52E5Q8NH55 327 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 LHFPL6Q9Y693 200 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 SPTBN2O15020 2390 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 MTCL1Q9Y4B5 1905 aaKnown RBP4.86□□□□□ -1.63
USP38-203ENST00000511739 TRGV1A0A0A0MS02 117 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 FABP5P3A8MUU1 101 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 J3QKU1 62 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 RFPL3SP0C7P2 107 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 CENPWQ5EE01 88 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 FAM186AA6NE01 2351 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 CENPVL1A0A0U1RR11 272 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 TIAF1O95411 115 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 AGAP20933 346 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
USP38-203ENST00000511739 TBR1Q16650 682 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 CIARTQ8N365 385 aaPredicted RBP4.86□□□□□ -1.63
USP38-203ENST00000511739 C9orf106Q8NAJ2 232 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
USP38-203ENST00000511739 CTHRC1Q96CG8 243 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 SLC25A38Q96DW6 304 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 RCHY1Q96PM5 261 aa4.86□□□□□ -1.63
USP38-203ENST00000511739 FRMPD3Q5JV73 1810 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 TRAV41A0A0B4J266 112 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 CCL3L1P16619 93 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 PKIAP61925 76 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 IGLV3-21P80748 117 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 GFI1BQ5VTD9 330 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 STPG2Q8N412 459 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 POC1AQ8NBT0 407 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 AQP3Q92482 292 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 DLX4Q92988 240 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 SMIM8Q96KF7 97 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 ZMAT4Q9H898 229 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 LAMTOR3Q9UHA4 124 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 PSPNO60542 156 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 HBDP02042 147 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 CD5P06127 495 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 NANOS3P60323 173 aaKnown RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 BMPERQ8N8U9 685 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 CKAP5Q14008 2032 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 EP400Q96L91 3159 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 PAX4O43316 350 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 IGHV3-53P01767 116 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 APOHP02749 345 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 OR9G9P0C7N8 305 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 IGHV1-2P23083 117 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 HOXD3P31249 432 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 GATA4P43694 442 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 MORN3Q6PF18 240 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 CD200R1LQ6Q8B3 271 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 TMEM133Q9H2Q1 129 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 VENTXO95231 258 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 PLNP26678 52 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 FUT5Q11128 374 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 SP5Q6BEB4 398 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 GATD1Q8NB37 220 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 ABCA1O95477 2261 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 TRBV9A0A0B4J1U6 114 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 LINC00587B1AMM8 73 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 KLF4O43474 513 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms