RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 CPNE2Q96FN4 548 aaPredicted RBP0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 DNAJC30Q96LL9 226 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 DCUN1D5Q9BTE7 237 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 CDCA4Q9BXL8 241 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 LRRC19Q9H756 370 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 SPANXB1Q9NS25 103 aaPredicted RBP0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 PSMD13Q9UNM6 376 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 MINOS1-NBL1R4GNA1 71 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 PI4KAP42356 2102 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 MYLKQ15746 1914 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 KNTC1P50748 2209 aa0.95□□□□□ -2.26
SCAMP1-204ENST00000511551 CHD3Q12873 2000 aaKnown RBP0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 PARP14Q460N5 1801 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 ESPL1Q14674 2120 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 ANKRD36CQ5JPF3 1778 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 FAT4Q6V0I7 4981 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 IGHV3-73A0A0B4J1V6 119 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 C1orf232A0A0U1RR37 186 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 TEX50A0A1B0GTY4 177 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 M0R381 172 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 MRASO14807 208 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 ZW10O43264 779 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 TRAPPC3O43617 180 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 STX10O60499 249 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 PSMG1O95456 288 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 C8orf88P0DMB2 117 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 CXCL3P19876 107 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 CD40LGP29965 261 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 LPAR6P43657 344 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 PSMD8P48556 350 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 TAS2R45P59539 299 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 CXCR4P61073 352 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 FABP5Q01469 135 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 LGALS9BQ3B8N2 356 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 SLC36A2Q495M3 483 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 DNAL1Q4LDG9 190 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 FAM9CQ8IZT9 166 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 OR2D3Q8NGH3 330 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 OR4K13Q8NH42 304 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 HAVCR2Q8TDQ0 301 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 Q8WTZ3 238 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 RNASE6Q93091 150 aaKnown RBP0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 MS4A6EQ96DS6 147 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 Q9BRP9 147 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 TIPINQ9BVW5 301 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 NSRP1Q9H0G5 558 aaKnown RBP0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 EMC3Q9P0I2 261 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 SNX12Q9UMY4 172 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 RNF213Q63HN8 5207 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 DOCK10Q96BY6 2186 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 AKAP6Q13023 2319 aa0.94□□□□□ -2.26
SCAMP1-204ENST00000511551 PLXNA4Q9HCM2 1894 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 TRAV8-1A0A0A6YYK1 113 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 A0A1W2PQL4 384 aaPredicted RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 GRIFINA4D1Z8 144 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 OR5K4A6NMS3 321 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 OR11H12B2RN74 326 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 GOLGA8KD6RF30 607 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 GOLGA8MH3BSY2 632 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 UBFD1O14562 309 aaKnown RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 GSTZ1O43708 216 aaPredicted RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 NDUFB2O95178 105 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 KRT75O95678 551 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 HLA-DRAP01903 254 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 COX5BP10606 129 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 PPP1CCP36873 323 aaKnown RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 IFNGR2P38484 337 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 CA7P43166 264 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 KRTAP12-1P59990 96 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 HPCAP84074 193 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 TPRXLQ17RH7 258 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 C1orf174Q8IYL3 243 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 Q8N402 240 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 TMEM251Q8N6I4 163 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 OR11H2Q8NH07 326 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 CLDND2Q8NHS1 167 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 C16orf78Q8WTQ4 265 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 CYGBQ8WWM9 190 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 PACRGQ96M98 296 aaPredicted RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 KCTD7Q96MP8 289 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 NKX6-2Q9C056 277 aaPredicted RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 TXNL4BQ9NX01 149 aaKnown RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 FAM206AQ9NX38 181 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 PRO2289Q9P1D8 64 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 C15orf41Q9Y2V0 281 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 HDGFL3Q9Y3E1 203 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 PCYT1BQ9Y5K3 369 aaPredicted RBP0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 ATP6V1DQ9Y5K8 247 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 FAM215AQ9Y5M1 114 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 CCDC88CQ9P219 2028 aa0.93□□□□□ -2.26
SCAMP1-204ENST00000511551 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 DIDO1Q9BTC0 2240 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 TNRC6BQ9UPQ9 1833 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 TMEM235A6NFC5 223 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 H3BPC8 53 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 MT-CO2P00403 227 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 P0DMU3 169 aa0.92□□□□□ -2.26
SCAMP1-204ENST00000511551 FAM231AP0DMU4 169 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms