RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TNFAIP8O95379 198 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 CST2P09228 141 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 OR5AL1P0C617 328 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 PFN2P35080 140 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 MAGEA6P43360 314 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 GABRA2P47869 451 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 RAB7AP51149 207 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 SYNJ2BPP57105 145 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 UBE2KP61086 200 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 PAFAH1B2P68402 229 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 IFFO1Q0D2I5 559 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 MED21Q13503 144 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 FLOT2Q14254 428 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 GNA13Q14344 377 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 BSXQ3C1V8 233 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ACTL10Q5JWF8 245 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 FAM71E1Q6IPT2 247 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ZFP2Q6ZN57 461 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF493Q6ZR52 646 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 AHSA2Q719I0 299 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 RIMKLAQ8IXN7 391 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF676Q8N7Q3 588 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 OR10J6PQ8NGY7 276 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 STAG3L4Q8TBR4 150 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ZFAND1Q8TCF1 268 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 APOBEC3DQ96AK3 386 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 SGTBQ96EQ0 304 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM133Q9H2Q1 129 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 VCXQ9H320 206 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 C1orf109Q9NX04 203 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 GUCA1BQ9UMX6 200 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 ST3GAL6Q9Y274 331 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 AP3M1Q9Y2T2 418 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 OR51B2Q9Y5P1 312 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAV36DV7A0A075B6V5 113 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 IGHV3-66A0A0C4DH42 116 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2AT4A6NND4 320 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 K7EN84 100 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 SULT1C2O00338 296 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 MPZL2O60487 215 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 UPK1BO75841 260 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2A4O95047 310 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 IGHV3-11P01762 117 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 C1QBP02746 253 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 TFF1P04155 84 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 GUSBP08236 651 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 PET100P0DJ07 73 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF728P0DKX0 622 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 MLNP12872 115 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 NPY1RP25929 384 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 GUCA1AP43080 201 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 MAGEA2P43356 314 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 UBE2AP49459 152 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 RND2P52198 227 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 DLX6P56179 175 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 RWDD2BP57060 319 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 LINC00315P59091 139 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 HPCAP84074 193 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 CDK5R1Q15078 307 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 RGS21Q2M5E4 152 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 DEFB116Q30KQ4 102 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 RBM48Q5RL73 367 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 C10orf128Q5T292 105 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 IDNKQ5T6J7 187 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 FAM27BQ5VT28 67 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF660Q6AZW8 331 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 THOC7Q6I9Y2 204 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 Q6ZRU5 148 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 Q8NAQ8 132 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR10W1Q8NGF6 305 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR5D16Q8NGK9 328 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2T27Q8NH04 317 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR8S1Q8NH09 359 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 TEX37Q96LM6 180 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF714Q96N38 554 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 OR7D2Q96RA2 312 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 DCUN1D5Q9BTE7 237 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF426Q9BUY5 554 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 SCRT1Q9BWW7 348 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 DPY30Q9C005 99 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 C6orf62Q9GZU0 229 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 DPH3P1Q9H4G8 78 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 CYB5R1Q9UHQ9 305 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 NAGKQ9UJ70 344 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 SLC7A11Q9UPY5 501 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 PSG11Q9UQ72 335 aa2.08□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAV41A0A0B4J266 112 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 IGHV3OR16-9A0A0B4J2B5 98 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 A0A1W2PRG6 482 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 ARRDC5A6NEK1 342 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 FABP12A6NFH5 140 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 SMIM23A6NLE4 172 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 CENPBD1B2RD01 187 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 G3V318 75 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 SMLR1H3BR10 107 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 GABRPO00591 440 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 BHLHE40O14503 412 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms