RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 TXN2Q99757 166 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 FAM110AQ9BQ89 295 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 A0A0G2JRQ6 117 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 INS-IGF2F8WCM5 200 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 TSPAN4O14817 238 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 CTDSPLO15194 276 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
TPM3-220ENST00000509601 UCP1P25874 307 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 TMBIM6P55061 237 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 PVRIGQ6DKI7 326 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 Q6ZRM9 215 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 RAB2BQ8WUD1 216 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 C20orf24Q9BUV8 137 aa13.37□□□□□ -0.27
TPM3-220ENST00000509601 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 ST8SIA3O43173 380 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 ETV6P41212 452 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 CCDC71LQ8N9Z2 235 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 SMIM4Q8WVI0 70 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
TPM3-220ENST00000509601 BCL7BQ9BQE9 202 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 NXF2Q9GZY0 626 aaKnown RBP13.36□□□□□ -0.27
TPM3-220ENST00000509601 GAR1Q9NY12 217 aaKnown RBP13.36□□□□□ -0.27
TPM3-220ENST00000509601 SMPXQ9UHP9 88 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
TPM3-220ENST00000509601 CDS2O95674 445 aa13.35□□□□□ -0.27
TPM3-220ENST00000509601 MEF2DQ14814 521 aa13.35□□□□□ -0.27
TPM3-220ENST00000509601 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
TPM3-220ENST00000509601 PINX1Q96BK5 328 aaKnown RBP13.35□□□□□ -0.27
TPM3-220ENST00000509601 OR10C1Q96KK4 312 aa13.35□□□□□ -0.27
TPM3-220ENST00000509601 SOSTQ9BQB4 213 aa13.35□□□□□ -0.27
TPM3-220ENST00000509601 CCDC59Q9P031 241 aaKnown RBP13.35□□□□□ -0.27
TPM3-220ENST00000509601 NUPL2O15504 423 aaKnown RBP13.34□□□□□ -0.27
TPM3-220ENST00000509601 ATG12O94817 140 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 RPL5P46777 297 aaKnown RBP13.34□□□□□ -0.27
TPM3-220ENST00000509601 AKR1C2P52895 323 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 IL18Q14116 193 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 TRIM16LQ309B1 348 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 LHFPL5Q8TAF8 219 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 GGTLC1Q9BX51 225 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
TPM3-220ENST00000509601 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
TPM3-220ENST00000509601 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 IGHV7-4-1A0A0J9YVY3 117 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 DISC1C4P0D8 188 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 CHEK1O14757 476 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 B3GALNT1O75752 331 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 IFNA17P01571 189 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 OR5AC1P0C628 307 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 RELQ04864 619 aaPredicted RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 MLANAQ16655 118 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 SELENOHQ8IZQ5 122 aaKnown RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 RNF2Q99496 336 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 RABL2AQ9UBK7 228 aaPredicted RBP13.33□□□□□ -0.28
TPM3-220ENST00000509601 UBQLN2Q9UHD9 624 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
TPM3-220ENST00000509601 H3BMQ9 156 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 GSTZ1O43708 216 aaPredicted RBP13.32□□□□□ -0.28
TPM3-220ENST00000509601 YIF1AO95070 293 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 TMEM50AO95807 157 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 AKAIN1P0CW23 69 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 SNCAP37840 140 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 SLC35G3Q8N808 338 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 TMEM116Q8NCL8 245 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
TPM3-220ENST00000509601 OVOL2Q9BRP0 275 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 NAA60Q9H7X0 242 aa13.32□□□□□ -0.28
TPM3-220ENST00000509601 IGHV3-49A0A0A0MS15 119 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 TRAV14DV4A0A0A6YYC5 116 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 ANKRD20A5PA0PJZ0 165 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 GNG7O60262 68 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 TNFSF8P32971 234 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 BSXQ3C1V8 233 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 TOMM20LQ6UXN7 152 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 OR51S1Q8NGJ8 323 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
TPM3-220ENST00000509601 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
TPM3-220ENST00000509601 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
TPM3-220ENST00000509601 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
TPM3-220ENST00000509601 C14orf166Q9Y224 244 aaKnown RBP13.31□□□□□ -0.28
TPM3-220ENST00000509601 CRYM-AS1A6NIL9 109 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 NPBWR1P48145 328 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 DHODHQ02127 395 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 FAM219AQ8IW50 185 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 OR52E5Q8NH55 327 aa13.3□□□□□ -0.28
TPM3-220ENST00000509601 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.3□□□□□ -0.28
TPM3-220ENST00000509601 IGHV3OR16-13A0A075B7E8 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms