RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
DDR1-263ENST00000508317 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
DDR1-263ENST00000508317 NUDT15Q9NV35 164 aa12.38□□□□□ -0.43
DDR1-263ENST00000508317 TRAV6A0A075B6T7 132 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
DDR1-263ENST00000508317 SNAPC5O75971 98 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 NDUFB8O95169 186 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 CLEC3BP05452 202 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
DDR1-263ENST00000508317 CD7P09564 240 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 H2AFB2P0C5Z0 115 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 OR4E1P0C645 316 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 AREGP15514 252 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 ANXA7P20073 488 aaKnown RBP12.37□□□□□ -0.43
DDR1-263ENST00000508317 VAMP1P23763 118 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 SRPXP78539 464 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 PPP1R1AQ13522 171 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 LAMTOR1Q6IAA8 161 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 RBPMSQ93062 196 aaKnown RBP12.37□□□□□ -0.43
DDR1-263ENST00000508317 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 WDR89Q96FK6 387 aaPredicted RBP12.37□□□□□ -0.43
DDR1-263ENST00000508317 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 TMEM56-RWDD3S4R434 201 aa12.37□□□□□ -0.43
DDR1-263ENST00000508317 UPK2O00526 184 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 SFT2D2O95562 160 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 REG1AP05451 166 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 CTRB1P17538 263 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 C4orf46Q504U0 113 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 LGI3Q8N145 548 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 FAM110AQ9BQ89 295 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
DDR1-263ENST00000508317 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
DDR1-263ENST00000508317 S4R3C0 116 aa12.36□□□□□ -0.43
DDR1-263ENST00000508317 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
DDR1-263ENST00000508317 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 A8MWP6 167 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
DDR1-263ENST00000508317 FGF2P09038 288 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 GPR183P32249 361 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 AKR1C2P52895 323 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 APOC4P55056 127 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
DDR1-263ENST00000508317 TMEM268Q5VZI3 342 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 SELENOHQ8IZQ5 122 aaKnown RBP12.35□□□□□ -0.43
DDR1-263ENST00000508317 RRNAD1Q96FB5 475 aaKnown RBP12.35□□□□□ -0.43
DDR1-263ENST00000508317 HINT2Q9BX68 163 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 RETNQ9HD89 108 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
DDR1-263ENST00000508317 OR2B8PP59922 312 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 DHRS2Q13268 280 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 SLC25A24Q6NUK1 477 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 LYG2Q86SG7 212 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 FAM219AQ8IW50 185 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
DDR1-263ENST00000508317 LHFPL5Q8TAF8 219 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 FANCD2OSQ96PS1 177 aa12.34□□□□□ -0.43
DDR1-263ENST00000508317 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 PTTG1O95997 202 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 OR13C7P0DN81 318 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 BTNL8Q6UX41 500 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 OR2C3Q8N628 320 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 LRTM2Q8N967 370 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 OR4A16Q8NH70 328 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 CACNG8Q8WXS5 425 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 LSM10Q969L4 123 aaKnown RBP12.33□□□□□ -0.44
DDR1-263ENST00000508317 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 PRR13Q9NZ81 148 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 PRNDQ9UKY0 176 aa12.33□□□□□ -0.44
DDR1-263ENST00000508317 DUXBA0A1W2PPF3 345 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-263ENST00000508317 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-263ENST00000508317 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-263ENST00000508317 P0C879 139 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 TM4SF20Q53R12 229 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 SPSB3Q6PJ21 355 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 LINC00322Q6ZN03 302 aaPredicted RBP12.32□□□□□ -0.44
DDR1-263ENST00000508317 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
DDR1-263ENST00000508317 SLC35G3Q8N808 338 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms