RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
RAB28-205ENST00000508274 A0A0B4J293 547 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 MFAP4P55083 255 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 PRR20EP86478 221 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 PRR20CP86479 221 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 PRR20DP86480 221 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 PRR20BP86481 221 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 PRR20AP86496 221 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 TRIM16LQ309B1 348 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 GGTLC1Q9BX51 225 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
RAB28-205ENST00000508274 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
RAB28-205ENST00000508274 IGHV3-49A0A0A0MS15 119 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 LCE6AA0A183 80 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 NUPL2O15504 423 aaKnown RBP10.62□□□□□ -0.71
RAB28-205ENST00000508274 ERHP84090 104 aaKnown RBP10.62□□□□□ -0.71
RAB28-205ENST00000508274 ODF3L2Q3SX64 289 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 ZFAND1Q8TCF1 268 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 C15orf40Q8WUR7 153 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 SMIM4Q8WVI0 70 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 RNF2Q99496 336 aa10.62□□□□□ -0.71
RAB28-205ENST00000508274 K7EMT4 169 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 YIF1AO95070 293 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 IFNA17P01571 189 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 CTSDP07339 412 aaPredicted RBP10.61□□□□□ -0.71
RAB28-205ENST00000508274 UCP1P25874 307 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 FCGR2BP31994 310 aaPredicted RBP10.61□□□□□ -0.71
RAB28-205ENST00000508274 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
RAB28-205ENST00000508274 SLC35G3Q8N808 338 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 DYNC2LI1Q8TCX1 351 aa10.61□□□□□ -0.71
RAB28-205ENST00000508274 NXF2Q9GZY0 626 aaKnown RBP10.61□□□□□ -0.71
RAB28-205ENST00000508274 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 CHEK1O14757 476 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 GNG7O60262 68 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 OR5AC1P0C628 307 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 ETV6P41212 452 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 MRPS10P82664 201 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 IL18Q14116 193 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 Q6ZRM9 215 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 OR4C16Q8NGL9 310 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 OR10C1Q96KK4 312 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 TXN2Q99757 166 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 OVOL2Q9BRP0 275 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 RTBDNQ9BSG5 229 aaPredicted RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 RHPN1-AS1Q9BWJ2 59 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 CCDC59Q9P031 241 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 IGHV7-4-1A0A0J9YVY3 117 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 RNASE2P10153 161 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 SNCAP37840 140 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 RNASE11Q8TAA1 199 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 RAB2BQ8WUD1 216 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 PDCD10Q9BUL8 212 aa10.6□□□□□ -0.71
RAB28-205ENST00000508274 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
RAB28-205ENST00000508274 IGKV3-7A0A075B6H7 116 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 MEF2DQ14814 521 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 TMEM116Q8NCL8 245 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 GLYATL2Q8WU03 294 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 RRNAD1Q96FB5 475 aaKnown RBP10.59□□□□□ -0.71
RAB28-205ENST00000508274 C6orf62Q9GZU0 229 aaPredicted RBP10.59□□□□□ -0.71
RAB28-205ENST00000508274 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
RAB28-205ENST00000508274 C14orf166Q9Y224 244 aaKnown RBP10.59□□□□□ -0.71
RAB28-205ENST00000508274 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
RAB28-205ENST00000508274 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 OR4C46A6NHA9 309 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 DISC1C4P0D8 188 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 CTDSPLO15194 276 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 ATG12O94817 140 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 TFPI2P48307 235 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 TMBIM6P55061 237 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 ZNF124Q15973 351 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 MLANAQ16655 118 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 TOMM20LQ6UXN7 152 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
RAB28-205ENST00000508274 NAA60Q9H7X0 242 aa10.58□□□□□ -0.72
RAB28-205ENST00000508274 TRAV14DV4A0A0A6YYC5 116 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
RAB28-205ENST00000508274 H3BMQ9 156 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 CDS2O95674 445 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 APOHP02749 345 aaPredicted RBP10.57□□□□□ -0.72
RAB28-205ENST00000508274 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
RAB28-205ENST00000508274 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 DUSP18Q8NEJ0 188 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms