RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 CACFD1Q9UGQ2 172 aa11.67□□□□□ -0.54
DDR1-258ENST00000506573 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 DBX1A6NMT0 343 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 TSPAN4O14817 238 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 MT-CO2P00403 227 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 CTSDP07339 412 aaPredicted RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 AKAIN1P0CW23 69 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 OR13C8Q8NGS7 320 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 SMIM4Q8WVI0 70 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 PRRT1Q99946 306 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 GINS3Q9BRX5 216 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 C6orf62Q9GZU0 229 aaPredicted RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 EDA2RQ9HAV5 297 aa11.66□□□□□ -0.54
DDR1-258ENST00000506573 RSL24D1Q9UHA3 163 aaKnown RBP11.66□□□□□ -0.54
DDR1-258ENST00000506573 CTDSP2O14595 271 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 CTDSPLO15194 276 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 CD5P06127 495 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 CTSGP08311 255 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 APOC4P55056 127 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 SPCS2Q15005 226 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 MARCH1Q8TCQ1 289 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 SCGB3A2Q96PL1 93 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 WFDC10AQ9H1F0 79 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 SELENOKQ9Y6D0 94 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 DNAH7Q8WXX0 4024 aa11.65□□□□□ -0.54
DDR1-258ENST00000506573 INS-IGF2F8WCM5 200 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 I3L2K1 104 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 UCP1P25874 307 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
DDR1-258ENST00000506573 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 DHODHQ02127 395 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 SP6Q3SY56 376 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 ZFAND6Q6FIF0 208 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 OR4D10Q8NGI6 311 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 NXF2Q9GZY0 626 aaKnown RBP11.64□□□□□ -0.55
DDR1-258ENST00000506573 MIXL1Q9H2W2 232 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
DDR1-258ENST00000506573 TRAV14DV4A0A0A6YYC5 116 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 PIGBOS1A0A0B4J2F0 54 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 ADMP35318 185 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
DDR1-258ENST00000506573 SMPXQ9UHP9 88 aa11.63□□□□□ -0.55
DDR1-258ENST00000506573 A0A0B4J293 547 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 F8W735 103 aaPredicted RBP11.62□□□□□ -0.55
DDR1-258ENST00000506573 UBE2CO00762 179 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
DDR1-258ENST00000506573 SPCS3P61009 180 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 DYNC2LI1Q8TCX1 351 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 RBPMSQ93062 196 aaKnown RBP11.62□□□□□ -0.55
DDR1-258ENST00000506573 OR10C1Q96KK4 312 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 FAM110AQ9BQ89 295 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 NAA60Q9H7X0 242 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 RETNQ9HD89 108 aa11.62□□□□□ -0.55
DDR1-258ENST00000506573 IGHV3OR16-8A0A075B7F1 116 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 RPS10-NUDT3A0A1W2PQS6 291 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 CDS2O95674 445 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 OR5AC1P0C628 307 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 P0C879 139 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
DDR1-258ENST00000506573 HTR2BP41595 481 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 IZUMO4Q1ZYL8 232 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
DDR1-258ENST00000506573 NARS2Q96I59 477 aaKnown RBP11.61□□□□□ -0.55
DDR1-258ENST00000506573 FABP12A6NFH5 140 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 CHEK1O14757 476 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 GSTZ1O43708 216 aaPredicted RBP11.6□□□□□ -0.55
DDR1-258ENST00000506573 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 ANXA3P12429 323 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 OPRK1P41145 380 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 ETV6P41212 452 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 HEYLQ9NQ87 328 aaPredicted RBP11.6□□□□□ -0.55
DDR1-258ENST00000506573 MCUBQ9NWR8 336 aa11.6□□□□□ -0.55
DDR1-258ENST00000506573 TRAV30A0A087WSZ9 112 aa11.59□□□□□ -0.55
DDR1-258ENST00000506573 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
DDR1-258ENST00000506573 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
DDR1-258ENST00000506573 A0A1W2PS18 150 aa11.59□□□□□ -0.55
DDR1-258ENST00000506573 AP3S2P59780 193 aa11.59□□□□□ -0.55
DDR1-258ENST00000506573 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms