RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 OR52E6Q96RD3 313 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 REG4Q9BYZ8 158 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 FAM96AQ9H5X1 160 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 GLTPQ9NZD2 209 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 BAIAP2Q9UQB8 552 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 CCDC144AA2RUR9 1427 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 DCCP43146 1447 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 WRNQ14191 1432 aaPredicted RBP eCLIP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 MTUS2Q5JR59 1369 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 CEP350Q5VT06 3117 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 ARFGEF3Q5TH69 2177 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 TMEM212A6NML5 194 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 HCRTO43612 131 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 CNIH1O95406 144 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 HAND1O96004 215 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 PMP2P02689 132 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 FGF6P10767 208 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 PSME3P61289 254 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 MRPS25P82663 173 aaKnown RBP0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 CAV1Q03135 178 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 RPL18Q07020 188 aaKnown RBP0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 EDDM3AQ14507 147 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 TMED2Q15363 201 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 TMEM97Q5BJF2 176 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 C10orf55Q5SWW7 151 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 GLT8D1Q68CQ7 371 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 OR6V1Q8N148 313 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 OR2T4Q8NH00 348 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 DCUN1D1Q96GG9 259 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 CNBD2Q96M20 576 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 EFCAB1Q9HAE3 211 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 PKIGQ9Y2B9 76 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 ECM29Q5VYK3 1845 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 MICAL3Q7RTP6 2002 aa0.93□□□□□ -2.26
TOPBP1-204ENST00000505804 ROS1P08922 2347 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 PLXND1Q9Y4D7 1925 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 A0A087WUJ7 227 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 IGKV2D-26A0A0A0MRZ7 120 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 A0A0J9YY10 115 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 A0A1B0GX78 115 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 SERPINA1P01009 418 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 C1QAP02745 245 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 TTRP02766 147 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 RPS4Y1P22090 263 aaKnown RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 HIST1H1TP22492 207 aaPredicted RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 NFYAP23511 347 aaPredicted RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 RPL5P46777 297 aaKnown RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 FXYD2P54710 66 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 SNRPD2P62316 118 aaKnown RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 ARF6P62330 175 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 RUNX1Q01196 453 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 ZNF345Q14585 488 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 CDK10Q15131 360 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 SPA17Q15506 151 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 LPCAT3Q6P1A2 487 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 KLK6Q92876 244 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 DGCR14Q96DF8 476 aaKnown RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 PPP1R2P1Q96PQ5 205 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 DCSTAMPQ9H295 470 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 CMTM6Q9NX76 183 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 MRPL27Q9P0M9 148 aaKnown RBP0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 FBXO5Q9UKT4 447 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 ARL2BPQ9Y2Y0 163 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 UBR2Q8IWV8 1755 aa0.92□□□□□ -2.26
TOPBP1-204ENST00000505804 POLEQ07864 2286 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 ZNF106Q9H2Y7 1883 aaKnown RBP0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 TRAV26-2A0A0B4J265 109 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 FAM236DA0A1B0GTK5 79 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 IRGMA1A4Y4 181 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 CLPSP04118 112 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 CST2P09228 141 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 METTL15P1P0C7V9 234 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 FAM236CP0DP71 79 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 PPP1R2P41236 205 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 HIST1H3AP68431 136 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 H3F3AP84243 136 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 PRB3Q04118 309 aaPredicted RBP0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 GUK1Q16774 197 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 LIN52Q52LA3 116 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 PPP1R2P3Q6NXS1 205 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 Q6ZS49 121 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 S100A7AQ86SG5 101 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 C20orf196Q8IYI0 205 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 KRT222Q8N1A0 295 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 BORCS7Q96B45 105 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 ODF3Q96PU9 254 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 CMSS1Q9BQ75 279 aaKnown RBP0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 TMEM147Q9BVK8 224 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 TRIM4Q9C037 500 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 YIPF3Q9GZM5 350 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 PRTFDC1Q9NRG1 225 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 CISHQ9NSE2 258 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 IDI2-AS1Q9NZ38 188 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 PRELID3BQ9Y3B1 194 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 ARL5AQ9Y689 179 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 NUP155O75694 1391 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 EIF3AQ14152 1382 aaKnown RBP0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 ROBO3Q96MS0 1386 aa0.91□□□□□ -2.26
TOPBP1-204ENST00000505804 MYH7BA7E2Y1 1941 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms