RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 UNC119Q13432 240 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 MUC21Q5SSG8 566 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 SLC25A30Q5SVS4 291 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 RBPMS2Q6ZRY4 209 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 TMEM116Q8NCL8 245 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 OR8G5Q8NG78 346 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 OR13G1Q8NGZ3 307 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 RPS4Y2Q8TD47 263 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 ST6GALNAC6Q969X2 333 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 PARP11Q9NR21 331 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 OCIAD1Q9NX40 245 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 YTHDF2Q9Y5A9 579 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 CEP192Q8TEP8 1941 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 PCDH15Q96QU1 1955 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 F8P00451 2351 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 OR4C46A6NHA9 309 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 C4orf51C9J302 202 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 F2RL2O00254 374 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 TNFRSF6BO95407 300 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 FSTP19883 344 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 RPS4Y1P22090 263 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 PSMB2P49721 201 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 FOXA3P55318 350 aaPredicted RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 TMEM50BP56557 158 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 RHOBP62745 196 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 ZNF141Q15928 474 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 ZNF841Q6ZN19 808 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 NIT1Q86X76 327 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 LEAP2Q969E1 77 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 PGLYRP3Q96LB9 341 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 TMEM147Q9BVK8 224 aa3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 SSBP3Q9BWW4 388 aaPredicted RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 WDR61Q9GZS3 305 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 LYRM2Q9NU23 88 aaPredicted RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 KLF13Q9Y2Y9 288 aaPredicted RBP3.08□□□□□ -1.92
PCDH11X-208ENST00000504220 PLXNB1O43157 2135 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 LIPT2A6NK58 231 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 F2Z2F3 143 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 CCDC179H3BU77 68 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 FOXS1O43638 330 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SRSF10O75494 262 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 S1PR2O95136 353 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PEBP1P30086 187 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RPL13AP40429 203 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RND3P61587 244 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RELBQ01201 579 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 FOXC1Q12948 553 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SRSF9Q13242 221 aaKnown RBP eCLIP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RTP5Q14D33 572 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RPEL1Q2QD12 228 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 HCP5Q6MZN7 132 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 ANKRD37Q7Z713 158 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 WFDC3Q8IUB2 231 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PTPMT1Q8WUK0 201 aaPredicted RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 WNT10AQ9GZT5 417 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 TMEM106BQ9NUM4 274 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PRO0461Q9UI25 63 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 LRRK1Q38SD2 2015 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PIEZO2Q9H5I5 2752 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 IGHV3OR16-13A0A075B7E8 117 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 IGHV3-74A0A0B4J1X5 117 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 LOC107984640A0A0U1RRK4 108 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 LOC101059948A0A1B0GTJ6 334 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 TEX48A0A1B0GUV7 120 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 A0A1W2PQM1 296 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 GAGE12HA6NDE8 117 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SMAD7O15105 426 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 HRASP01112 189 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SMIM17P0DL12 118 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 OR10J1P30954 320 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 P2RY1P47900 373 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 CCL8P80075 99 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 EIF3IQ13347 325 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 FREM2Q5SZK8 3169 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 UTF1Q5T230 341 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PMS2CLQ68D20 193 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 VKORC1L1Q8N0U8 176 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PNKDQ8N490 385 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 Q8TCH9 128 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 TMEM170AQ8WVE7 144 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RPEQ96AT9 228 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 COX14Q96I36 57 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 GPX7Q96SL4 187 aaPredicted RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 HES7Q9BYE0 225 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 KLK15Q9H2R5 256 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 AAMDCQ9H7C9 122 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SH2D2AQ9NP31 389 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 FBXL7Q9UJT9 491 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 F11RQ9Y624 299 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 WDFY4Q6ZS81 3184 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 A0A0J9YW62 118 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 C10orf142B7Z368 130 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 KLK10O43240 276 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 SEC11BP0C7V7 166 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 FKBP2P26885 142 aaKnown RBP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 MAGEA5P43359 124 aa3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 RPS11P62280 158 aaKnown RBP eCLIP3.07□□□□□ -1.92
PCDH11X-208ENST00000504220 PNRC1Q12796 327 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms