RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 A0A1B0GTI1 187 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 NTN3O00634 580 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 LINC00271P0C7V0 271 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 EFNB1P98172 346 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 CYB5R2Q6BCY4 276 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF525Q8N782 197 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 ST20Q9HBF5 79 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 K7ERU9 68 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 GNLYP22749 145 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 ZCCHC24Q8N2G6 241 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 RAMP3O60896 148 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 CRPP02741 224 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF585BQ52M93 769 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 Q6AWC8 147 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 C8orf46Q8TAG6 207 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 IMMP2LQ96T52 175 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 PARD6GQ9BYG4 376 aaPredicted RBP5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 C3orf36Q3SXR2 165 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM183AQ8IXX5 376 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 C11orf44Q8N8P7 122 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 SCN10AQ9Y5Y9 1956 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TIMM23O14925 209 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 FOXF2Q12947 444 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TTC32Q5I0X7 151 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TCF23Q7RTU1 214 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 UBE2DNLQ8IWF7 75 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 RNF125Q96EQ8 232 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 SIGLEC15Q6ZMC9 328 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 VGLL1Q99990 258 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TRPM7Q96QT4 1865 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 TRGV4A0A0C4DH28 118 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 SHISA3A0PJX4 238 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 C1QTNF9BB2RNN3 333 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 SRD5A1P18405 259 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 FAM209BQ5JX69 171 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 WFDC12Q8WWY7 111 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 FAM131CQ96AQ9 280 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 KIAA0100Q14667 2235 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 MPTX1A8MV57 137 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 ERVH48-1M5A8F1 160 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 OR9G9P0C7N8 305 aa5.98□□□□□ -1.45
SYNPO2-205ENST00000504178 NYNRINQ9P2P1 1898 aaKnown RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 IGKV1D-13A0A0B4J2D9 117 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TRBV7-9A0A0J9YWB2 115 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 SAP30O75446 220 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM50AO95807 157 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 IGKV1-13P0DP09 117 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 CCL1P22362 96 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ASCL2Q99929 193 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV41A0A0B4J266 112 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 DPRXA6NFQ7 191 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 SRP19P09132 144 aaKnown RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 FBLN7Q53RD9 439 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF324BQ6AW86 544 aaPredicted RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF600Q6ZNG1 722 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 JKAMPQ9P055 326 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 PCM1Q15154 2024 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV21A0A0B4J279 112 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 PAX8Q06710 450 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ORMDL3Q8N138 153 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 FGFBP3Q8TAT2 258 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TBL2Q9Y4P3 447 aaKnown RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF98A6NK75 572 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF688P0C7X2 276 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 KLRD1Q13241 179 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 IGHV2-26A0A0B4J1V2 119 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 FABP5P3A8MUU1 101 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 DDTP30046 118 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TIMP3P35625 211 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF415Q09FC8 603 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM144Q7Z5S9 345 aa5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 SDHCQ99643 169 aaPredicted RBP5.97□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV9-1A0A075B6T8 112 aa5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 LYPD3O95274 346 aa5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF672Q499Z4 452 aaPredicted RBP5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 DTX2Q86UW9 622 aa5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF257Q9Y2Q1 563 aa5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 SELENOKQ9Y6D0 94 aa5.96□□□□□ -1.45
SYNPO2-205ENST00000504178 MLNRO43193 412 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 NAT1P18440 290 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 EFNA4P52798 201 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM90A9PA6NNJ1 464 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 HIGD1CA8MV81 97 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 IL18BPO95998 194 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 IFI27P40305 119 aaPredicted RBP5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 ERVK11-1P61568 191 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 PRCDQ00LT1 54 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM166AQ6J272 317 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 SNAI2O43623 268 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 PSMG4Q5JS54 123 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 GTF3AQ92664 365 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A28Q96A46 364 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 RNASE7Q9H1E1 156 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 DPH3P1Q9H4G8 78 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 OVOL1O14753 267 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 PYYP10082 97 aa5.96□□□□□ -1.46
SYNPO2-205ENST00000504178 TTC9CQ8N5M4 171 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms