RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 C5orf66Q9H5L9 145 aa16.58■□□□□ 0.24
LSM6-203ENST00000503982 MCUBQ9NWR8 336 aa16.58■□□□□ 0.24
LSM6-203ENST00000503982 F11RQ9Y624 299 aaKnown RBP16.58■□□□□ 0.24
LSM6-203ENST00000503982 RBMY1BA6NDE4 496 aaKnown RBP16.57■□□□□ 0.24
LSM6-203ENST00000503982 RBMY1EA6NEQ0 496 aaKnown RBP16.57■□□□□ 0.24
LSM6-203ENST00000503982 RBMY1DP0C7P1 496 aaKnown RBP16.57■□□□□ 0.24
LSM6-203ENST00000503982 H2BFWTQ7Z2G1 175 aa16.57■□□□□ 0.24
LSM6-203ENST00000503982 HIPK2Q9H2X6 1198 aa16.57■□□□□ 0.24
LSM6-203ENST00000503982 NDUFA4L2Q9NRX3 87 aa16.57■□□□□ 0.24
LSM6-203ENST00000503982 MRPL27Q9P0M9 148 aaKnown RBP16.57■□□□□ 0.24
LSM6-203ENST00000503982 C14orf166Q9Y224 244 aaKnown RBP16.57■□□□□ 0.24
LSM6-203ENST00000503982 ZNF846Q147U1 533 aa16.56■□□□□ 0.24
LSM6-203ENST00000503982 OR1L6Q8NGR2 347 aa16.56■□□□□ 0.24
LSM6-203ENST00000503982 BSCL2Q96G97 398 aaPredicted RBP16.56■□□□□ 0.24
LSM6-203ENST00000503982 C20orf24Q9BUV8 137 aa16.56■□□□□ 0.24
LSM6-203ENST00000503982 C21orf62Q9NYP8 219 aa16.56■□□□□ 0.24
LSM6-203ENST00000503982 COPZ2Q9P299 210 aa16.56■□□□□ 0.24
LSM6-203ENST00000503982 INPP1P49441 399 aa16.55■□□□□ 0.24
LSM6-203ENST00000503982 ELLP55199 621 aaPredicted RBP16.55■□□□□ 0.24
LSM6-203ENST00000503982 LINC00322Q6ZN03 302 aaPredicted RBP16.55■□□□□ 0.24
LSM6-203ENST00000503982 OR5B3Q8NH48 314 aa16.55■□□□□ 0.24
LSM6-203ENST00000503982 MISP3Q96FF7 219 aa16.55■□□□□ 0.24
LSM6-203ENST00000503982 GAR1Q9NY12 217 aaKnown RBP16.55■□□□□ 0.24
LSM6-203ENST00000503982 DYNC2H1Q8NCM8 4307 aaKnown RBP16.54■□□□□ 0.24
LSM6-203ENST00000503982 CRYM-AS1A6NIL9 109 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 C15orf61A6NNL5 157 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 PI3P19957 117 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 UCP1P25874 307 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 RBMS2Q15434 407 aaKnown RBP16.54■□□□□ 0.24
LSM6-203ENST00000503982 SPSB3Q6PJ21 355 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 SCARB1Q8WTV0 552 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 TMEM190Q8WZ59 177 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 GALNT14Q96FL9 552 aa16.54■□□□□ 0.24
LSM6-203ENST00000503982 ZNF436Q9C0F3 470 aaPredicted RBP16.54■□□□□ 0.24
LSM6-203ENST00000503982 IGHV3OR16-8A0A075B7F1 116 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 TRAV25A0A0B4J276 109 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 C3orf85A0A1B0GTC6 90 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 CENPXA8MT69 81 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 ZNF207O43670 478 aaKnown RBP16.53■□□□□ 0.24
LSM6-203ENST00000503982 BTCP35070 178 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 MFAP2P55001 183 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 TP53RKQ96S44 253 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 NAA60Q9H7X0 242 aa16.53■□□□□ 0.24
LSM6-203ENST00000503982 LOC102724200A0A096LPH7 203 aaPredicted RBP16.52■□□□□ 0.24
LSM6-203ENST00000503982 NDUFA4O00483 81 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 PLA2G10O15496 165 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 LAMTOR1Q6IAA8 161 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 OR2C3Q8N628 320 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 TMEM230Q96A57 120 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 SEC22AQ96IW7 307 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 GGTLC1Q9BX51 225 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 DAZ1Q9NQZ3 744 aaKnown RBP16.52■□□□□ 0.24
LSM6-203ENST00000503982 UBQLN2Q9UHD9 624 aa16.52■□□□□ 0.24
LSM6-203ENST00000503982 DBX1A6NMT0 343 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 NDUFB6O95139 128 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 IGKV1-39P01597 117 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 IGKV1D-39P04432 117 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 C8orf88P0DMB2 117 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 IL17DQ8TAD2 202 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 PINX1Q96BK5 328 aaKnown RBP16.51■□□□□ 0.23
LSM6-203ENST00000503982 CHRDL1Q9BU40 450 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 TMEM222Q9H0R3 208 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 TMEM14BQ9NUH8 114 aa16.51■□□□□ 0.23
LSM6-203ENST00000503982 YIF1AO95070 293 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 CDS2O95674 445 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 P0C879 139 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 UBE2MP61081 183 aaKnown RBP16.5■□□□□ 0.23
LSM6-203ENST00000503982 DHODHQ02127 395 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 OR1P1Q8NH06 330 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 GLYATL2Q8WU03 294 aa16.5■□□□□ 0.23
LSM6-203ENST00000503982 TEX13DA0A0J9YY54 714 aaPredicted RBP16.49■□□□□ 0.23
LSM6-203ENST00000503982 LCE6AA0A183 80 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 K7EIM0 57 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 NUPL2O15504 423 aaKnown RBP16.49■□□□□ 0.23
LSM6-203ENST00000503982 LYRM1O43325 122 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 UPK1BO75841 260 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 ATG12O94817 140 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 AKR1C2P52895 323 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 MFAP4P55083 255 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 ERHP84090 104 aaKnown RBP16.49■□□□□ 0.23
LSM6-203ENST00000503982 TMEM128Q5BJH2 165 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 SPINK9Q5DT21 86 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 IL22RA2Q969J5 263 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 SPAG8Q99932 426 aaPredicted RBP16.49■□□□□ 0.23
LSM6-203ENST00000503982 TMEM56-RWDD3S4R434 201 aa16.49■□□□□ 0.23
LSM6-203ENST00000503982 PIGBOS1A0A0B4J2F0 54 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 SUPT4H1P63272 117 aaKnown RBP16.48■□□□□ 0.23
LSM6-203ENST00000503982 PRCDQ00LT1 54 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 RELQ04864 619 aaPredicted RBP16.48■□□□□ 0.23
LSM6-203ENST00000503982 ASAH1Q13510 395 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 RNASE11Q8TAA1 199 aaKnown RBP16.48■□□□□ 0.23
LSM6-203ENST00000503982 ATP6V0BQ99437 205 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 PDCD10Q9BUL8 212 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 KCNIP3Q9Y2W7 256 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 TENM2Q9NT68 2774 aa16.48■□□□□ 0.23
LSM6-203ENST00000503982 IGHV3-48P01763 117 aa16.47■□□□□ 0.23
LSM6-203ENST00000503982 OR5AC1P0C628 307 aa16.47■□□□□ 0.23
LSM6-203ENST00000503982 HSPE1P61604 102 aaKnown RBP16.47■□□□□ 0.23
LSM6-203ENST00000503982 TRIM16LQ309B1 348 aa16.47■□□□□ 0.23
LSM6-203ENST00000503982 SLC35G3Q8N808 338 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms