RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 OR1S1Q8NH92 325 aa19.27■□□□□ 0.68
LSM6-202ENST00000502781 ATP6V0BQ99437 205 aa19.27■□□□□ 0.68
LSM6-202ENST00000502781 I3L2K1 104 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 OVOL1O14753 267 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 IGHV3-23P01764 117 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 IL5P05113 134 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 KPRPQ5T749 579 aaPredicted RBP19.26■□□□□ 0.67
LSM6-202ENST00000502781 ZNF431Q8TF32 576 aaPredicted RBP19.26■□□□□ 0.67
LSM6-202ENST00000502781 SCARB1Q8WTV0 552 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 SEC22CQ9BRL7 303 aa19.26■□□□□ 0.67
LSM6-202ENST00000502781 CEBPZOSA8MTT3 80 aa19.25■□□□□ 0.67
LSM6-202ENST00000502781 FAM90A26D6RGX4 464 aa19.25■□□□□ 0.67
LSM6-202ENST00000502781 WIPF1O43516 503 aa19.25■□□□□ 0.67
LSM6-202ENST00000502781 NXPH3O95157 252 aa19.25■□□□□ 0.67
LSM6-202ENST00000502781 CLEC19AQ6UXS0 136 aa19.25■□□□□ 0.67
LSM6-202ENST00000502781 HEYLQ9NQ87 328 aaPredicted RBP19.25■□□□□ 0.67
LSM6-202ENST00000502781 MPTX1A8MV57 137 aa19.24■□□□□ 0.67
LSM6-202ENST00000502781 HTR2BP41595 481 aa19.24■□□□□ 0.67
LSM6-202ENST00000502781 SUB1P53999 127 aaKnown RBP eCLIP19.24■□□□□ 0.674e-6■■■□□ 17.5
LSM6-202ENST00000502781 BEAN1Q3B7T3 259 aa19.24■□□□□ 0.67
LSM6-202ENST00000502781 PPP5D1E7EU14 171 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 F8W735 103 aaPredicted RBP19.23■□□□□ 0.67
LSM6-202ENST00000502781 IFNA21P01568 189 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 CLEC3BP05452 202 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 RPEL1Q2QD12 228 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 C2orf83Q53S99 150 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 C11orf87Q6NUJ2 197 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 DTD1Q8TEA8 209 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 TMEM170AQ8WVE7 144 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 MISP3Q96FF7 219 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 MARVELD1Q9BSK0 173 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 GPR61Q9BZJ8 451 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 RBKSQ9H477 322 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 C21orf62Q9NYP8 219 aa19.23■□□□□ 0.67
LSM6-202ENST00000502781 IGHV3-21A0A0B4J1V1 117 aa19.22■□□□□ 0.67
LSM6-202ENST00000502781 GGCTO75223 188 aaKnown RBP19.22■□□□□ 0.67
LSM6-202ENST00000502781 PLET1Q6UQ28 207 aa19.22■□□□□ 0.67
LSM6-202ENST00000502781 C1QL4Q86Z23 238 aa19.22■□□□□ 0.67
LSM6-202ENST00000502781 HIPK2Q9H2X6 1198 aa19.22■□□□□ 0.67
LSM6-202ENST00000502781 CORTO00230 105 aa19.21■□□□□ 0.67
LSM6-202ENST00000502781 MT-CO2P00403 227 aa19.21■□□□□ 0.67
LSM6-202ENST00000502781 FCGR2BP31994 310 aaPredicted RBP19.21■□□□□ 0.67
LSM6-202ENST00000502781 ARL3P36405 182 aa19.21■□□□□ 0.67
LSM6-202ENST00000502781 ACSM6Q6P461 480 aa19.21■□□□□ 0.67
LSM6-202ENST00000502781 C12orf45Q8N5I9 185 aaPredicted RBP19.21■□□□□ 0.67
LSM6-202ENST00000502781 SLC24A4Q8NFF2 622 aa19.21■□□□□ 0.67
LSM6-202ENST00000502781 SEC14L6B5MCN3 397 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 INMT-MINDY4F8WBC2 141 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 GPR183P32249 361 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 SYNJ2BPP57105 145 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 C9orf66Q5T8R8 295 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 OR4D5Q8NGN0 318 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 PALMDQ9NP74 551 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 U3KQ87 197 aa19.2■□□□□ 0.66
LSM6-202ENST00000502781 ID3Q02535 119 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 GPHB5Q86YW7 130 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 PINX1Q96BK5 328 aaKnown RBP19.19■□□□□ 0.66
LSM6-202ENST00000502781 BSCL2Q96G97 398 aaPredicted RBP19.19■□□□□ 0.66
LSM6-202ENST00000502781 OR10C1Q96KK4 312 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 TXN2Q99757 166 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 FNDC4Q9H6D8 234 aaPredicted RBP19.19■□□□□ 0.66
LSM6-202ENST00000502781 TGOLN2O43493 480 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 PRAF2O60831 178 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 OR2C1O95371 312 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 INSL3P51460 131 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 EGFEM1PQ0D2K5 195 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 OR9G4Q8NGQ1 327 aa19.19■□□□□ 0.66
LSM6-202ENST00000502781 SYNGR2O43760 224 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 MED6O75586 246 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 NPY1RP25929 384 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 MFAP4P55083 255 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 ATP5IP56385 69 aaPredicted RBP19.18■□□□□ 0.66
LSM6-202ENST00000502781 TATDN3Q17R31 274 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 IAH1Q2TAA2 248 aaPredicted RBP19.18■□□□□ 0.66
LSM6-202ENST00000502781 SPSB3Q6PJ21 355 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 IL34Q6ZMJ4 242 aa19.18■□□□□ 0.66
LSM6-202ENST00000502781 RNASEH2CQ8TDP1 164 aaKnown RBP19.18■□□□□ 0.66
LSM6-202ENST00000502781 OR2T8A6NH00 312 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 SNRPGP15A8MWD9 76 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 LGALS9O00182 355 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 CTSGP08311 255 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 SPNP16150 400 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 ADMP35318 185 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 NOXA1Q86UR1 476 aa19.17■□□□□ 0.66
LSM6-202ENST00000502781 GPN1Q9HCN4 374 aaPredicted RBP19.17■□□□□ 0.66
LSM6-202ENST00000502781 GAR1Q9NY12 217 aaKnown RBP19.17■□□□□ 0.66
LSM6-202ENST00000502781 PTTG1O95997 202 aa19.16■□□□□ 0.66
LSM6-202ENST00000502781 IFNA10P01566 189 aa19.16■□□□□ 0.66
LSM6-202ENST00000502781 NKX2-1P43699 371 aaPredicted RBP19.16■□□□□ 0.66
LSM6-202ENST00000502781 ZBTB8BQ8NAP8 495 aaPredicted RBP19.16■□□□□ 0.66
LSM6-202ENST00000502781 CIB3Q96Q77 187 aaPredicted RBP19.16■□□□□ 0.66
LSM6-202ENST00000502781 CHRDL1Q9BU40 450 aa19.16■□□□□ 0.66
LSM6-202ENST00000502781 MAGT1Q9H0U3 335 aa19.16■□□□□ 0.66
LSM6-202ENST00000502781 CCSO14618 274 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 IGHV3-48P01763 117 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 Q56UQ5 140 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 REC114Q7Z4M0 266 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 UXS1Q8NBZ7 420 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 ZC4H2Q9NQZ6 224 aa19.15■□□□□ 0.66
LSM6-202ENST00000502781 LY86O95711 162 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms