RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 GATA3P23771 443 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 NKX2-1P43699 371 aaPredicted RBP3.69□□□□□ -1.82
MATR3-202ENST00000502422 CEBPDP49716 269 aaPredicted RBP3.69□□□□□ -1.82
MATR3-202ENST00000502422 ARFRP1Q13795 201 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 ZNF141Q15928 474 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 TMEM41BQ5BJD5 291 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 LRRC10Q5BKY1 277 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 FAM78BQ5VT40 261 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 CARD17Q5XLA6 110 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 DGAT2L7PQ6IED9 249 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 ASCL4Q6XD76 172 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 TCF23Q7RTU1 214 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.69□□□□□ -1.82
MATR3-202ENST00000502422 TMEM217Q8N7C4 229 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 SIGLECL1Q8N7X8 197 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 OR5AU1Q8NGC0 362 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 OR4S2Q8NH73 311 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 ZNF596Q8TC21 504 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 MRPL13Q9BYD1 178 aaKnown RBP3.69□□□□□ -1.82
MATR3-202ENST00000502422 PARLQ9H300 379 aa3.69□□□□□ -1.82
MATR3-202ENST00000502422 DUXBA0A1W2PPF3 345 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 A8MZ25 164 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 K7ERU9 68 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 WNT9BO14905 357 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 TIMM23O14925 209 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 MLNRO43193 412 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 GYPAP02724 150 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 GPX1P07203 203 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 MALP21145 153 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ANOS1P23352 680 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 NPPCP23582 126 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 NPBWR2P48146 333 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PAX9P55771 341 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 LMO4P61968 165 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ZNF154Q13106 437 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 SLAQ13239 276 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 GNMTQ14749 295 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ARL6IP1Q15041 203 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 CXorf66Q5JRM2 361 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 PHYHD1Q5SRE7 291 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PRR27Q6MZM9 219 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 KCTD18Q6PI47 426 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 OR1K1Q8NGR3 316 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 RTN4IP1Q8WWV3 396 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 ATP5SQ99766 215 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 C1QTNF5Q9BXJ0 243 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 TMEM59Q9BXS4 323 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PECRQ9BY49 303 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PATZ1Q9HBE1 687 aaKnown RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 FAM206AQ9NX38 181 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 NBEAL2Q6ZNJ1 2754 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PPIAL4EA0A075B759 164 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PPIAL4CA0A0B4J2A2 164 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PRSS37A4D1T9 235 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 GAGE10A6NGK3 116 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 OR2T8A6NH00 312 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 DNAJC9-AS1A6NH13 148 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 SH2D7A6NKC9 451 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 PPIAL4DF5H284 164 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 G3V4G9 280 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 TMEM250H0YL14 139 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 SSSCA1O60232 199 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 SLC16A7O60669 478 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 IGKV3-15P01624 115 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 HLA-HP01893 362 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PPIAL4FP0DN26 164 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 KITLGP21583 273 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 TIRAPP58753 221 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 KRTDAPP60985 99 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 SRPXP78539 464 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 MEF2BQ02080 365 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 BAXQ07812 192 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 Q0VG73 95 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 OR4A47Q6IF82 309 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 FAM71F2Q6NXP2 309 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 NIT1Q86X76 327 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ZNF440Q8IYI8 595 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PNKDQ8N490 385 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 OR11L1Q8NGX0 322 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ASB10Q8WXI3 467 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 BTF3L4Q96K17 158 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 ASCL2Q99929 193 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 HDHD3Q9BSH5 251 aaPredicted RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 CLEC5AQ9NY25 188 aa3.68□□□□□ -1.82
MATR3-202ENST00000502422 PEF1Q9UBV8 284 aaKnown RBP3.68□□□□□ -1.82
MATR3-202ENST00000502422 KIAA2026Q5HYC2 2103 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 GAGE12BA1L429 117 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 RAMP3O60896 148 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 NPIPB7O75200 414 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 ZNF737O75373 536 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 IGKV1D-33P01593 117 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 IGKV1-33P01594 117 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 IGLV1-44P01699 117 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 CELA3BP08861 270 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 ZNF728P0DKX0 622 aa3.67□□□□□ -1.82
MATR3-202ENST00000502422 ZNF133P52736 654 aaPredicted RBP3.67□□□□□ -1.82
MATR3-202ENST00000502422 MRPS34P82930 218 aaKnown RBP3.67□□□□□ -1.82
MATR3-202ENST00000502422 PSG4Q00888 419 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms