RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-228ENST00000498814 ATP6V0BQ99437 205 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 SEC22CQ9BRL7 303 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 MCRIP2Q9BUT9 160 aaKnown RBP11.96□□□□□ -0.49
CPNE1-228ENST00000498814 HIPK2Q9H2X6 1198 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 HEYLQ9NQ87 328 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-228ENST00000498814 K7EIM0 57 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 BMPR1BO00238 502 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 NXPH3O95157 252 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 IGLL1P15814 213 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 KLF5Q13887 457 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-228ENST00000498814 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 CLEC19AQ6UXS0 136 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 MISP3Q96FF7 219 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 MARVELD1Q9BSK0 173 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 RBKSQ9H477 322 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 S4R3C0 116 aa11.95□□□□□ -0.5
CPNE1-228ENST00000498814 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 INMT-MINDY4F8WBC2 141 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 I3L2K1 104 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 CORTO00230 105 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 OVOL1O14753 267 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 PRAF2O60831 178 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 CLEC3BP05452 202 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 C12orf45Q8N5I9 185 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-228ENST00000498814 DTD1Q8TEA8 209 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 GPR61Q9BZJ8 451 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 GPN1Q9HCN4 374 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-228ENST00000498814 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
CPNE1-228ENST00000498814 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 G3V4G9 280 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 GGCTO75223 188 aaKnown RBP11.93□□□□□ -0.5
CPNE1-228ENST00000498814 MED6O75586 246 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 MT-CO2P00403 227 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-228ENST00000498814 ARL3P36405 182 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 C2orf83Q53S99 150 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 U3KQ87 197 aa11.93□□□□□ -0.5
CPNE1-228ENST00000498814 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 SNRPGP15A8MWD9 76 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 WIPF1O43516 503 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 PTTG1O95997 202 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-228ENST00000498814 ID3Q02535 119 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 TATDN3Q17R31 274 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 NOXA1Q86UR1 476 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
CPNE1-228ENST00000498814 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 TXN2Q99757 166 aa11.92□□□□□ -0.5
CPNE1-228ENST00000498814 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
CPNE1-228ENST00000498814 SEC14L6B5MCN3 397 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 SYNGR2O43760 224 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 LY86O95711 162 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 SPNP16150 400 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 NPY1RP25929 384 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 GPR183P32249 361 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 MFAP4P55083 255 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 KPRPQ5T749 579 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 C11orf87Q6NUJ2 197 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 UXS1Q8NBZ7 420 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 TMEM170AQ8WVE7 144 aa11.91□□□□□ -0.5
CPNE1-228ENST00000498814 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 CIB3Q96Q77 187 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-228ENST00000498814 TGOLN2O43493 480 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 OR2C1O95371 312 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 IFNA10P01566 189 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-228ENST00000498814 INSL3P51460 131 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 BEAN1Q3B7T3 259 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-228ENST00000498814 MAGT1Q9H0U3 335 aa11.9□□□□□ -0.5
CPNE1-228ENST00000498814 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 LGALS9O00182 355 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 CCSO14618 274 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 OPRK1P41145 380 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
CPNE1-228ENST00000498814 Q56UQ5 140 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
CPNE1-228ENST00000498814 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-228ENST00000498814 RPS10-NUDT3A0A1W2PQS6 291 aa11.88□□□□□ -0.51
CPNE1-228ENST00000498814 WRBO00258 174 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms