RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 AREGP15514 252 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 NPY1RP25929 384 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 CX3CL1P78423 397 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PRR20EP86478 221 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PRR20CP86479 221 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PRR20DP86480 221 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PRR20BP86481 221 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PRR20AP86496 221 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-206ENST00000498614 C17orf58Q2M2W7 97 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 C1orf185Q5T7R7 199 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 TMEM136Q6ZRR5 245 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 C22orf34Q6ZV56 151 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 DEFB108BQ8NET1 73 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 TRGV8A0A0C4DH27 118 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 HELTA6NFD8 242 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 LINC00869P0C866 280 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 SFTPCP11686 197 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 CTRLP40313 264 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 MRPS11P82912 194 aaKnown RBP13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PSG5Q15238 335 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 OR4B1Q8NGF8 309 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 RNF2Q99496 336 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 PPIAL4AQ9Y536 164 aa13.39□□□□□ -0.27
COL6A1-206ENST00000498614 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-206ENST00000498614 A0A1W2PS18 150 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 C15orf61A6NNL5 157 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 PMCHP20382 165 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 AMTP48728 403 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 CT45A1Q5HYN5 189 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 CT45A3Q8NHU0 189 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 IGLV3-9A0A075B6K5 115 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
COL6A1-206ENST00000498614 OR10J4P0C629 311 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 LINC00614P0C842 121 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 RAB31Q13636 194 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 MMDQ15546 238 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 SPATA45Q537H7 98 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 DDB2Q92466 427 aa13.38□□□□□ -0.27
COL6A1-206ENST00000498614 DSCAML1Q8TD84 2053 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 SAA2-SAA4A0A096LPE2 208 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 SAA2P0DJI9 122 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-206ENST00000498614 CGB3P0DN86 165 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 CGB7P0DN87 165 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 COL5A1-AS1Q5SY13 56 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 Q8NA96 180 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 FAM216AQ8WUB2 273 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 KCNS1Q96KK3 526 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 RAB7AP51149 207 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 TNFAIP6P98066 277 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-206ENST00000498614 PRR30Q53SZ7 412 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-206ENST00000498614 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 WDR73Q6P4I2 378 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 ZNF503Q96F45 646 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 RNF7Q9UBF6 113 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 IL19Q9UHD0 177 aa13.37□□□□□ -0.27
COL6A1-206ENST00000498614 IGHV1-46P01743 117 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 MT-ND6P03923 174 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 GNG10P50151 68 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 SUMO1P63165 101 aaKnown RBP13.36□□□□□ -0.27
COL6A1-206ENST00000498614 OR10J3Q5JRS4 329 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 OR4A47Q6IF82 309 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 MRPL54Q6P161 138 aaKnown RBP13.36□□□□□ -0.27
COL6A1-206ENST00000498614 MOB3BQ86TA1 216 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 HINT2Q9BX68 163 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 TANC2Q9HCD6 1990 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 KBTBD11-OT1A0A1B0GTJ5 212 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 BMPR1BO00238 502 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 ZNF253O75346 499 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 SRIP30626 198 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
COL6A1-206ENST00000498614 LYG1Q8N1E2 194 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 NEUROG1Q92886 237 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 CCL13Q99616 98 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 NABP2Q9BQ15 211 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 OSTCQ9NRP0 149 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 SLC25A10Q9UBX3 287 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-206ENST00000498614 SLC45A2Q9UMX9 530 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 NBASA2RRP1 2371 aa13.36□□□□□ -0.27
COL6A1-206ENST00000498614 GGTLC3B5MD39 225 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 GATA2P23769 480 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-206ENST00000498614 CHRNB4P30926 498 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 KIR2DS2P43631 304 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 LY6DQ14210 128 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 ZGRF1Q86YA3 2104 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 FAM216BQ8N7L0 139 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 ENY2Q9NPA8 101 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-206ENST00000498614 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 GATA4P43694 442 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 TIGITQ495A1 244 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 ASPHD1Q5U4P2 390 aa13.35□□□□□ -0.27
COL6A1-206ENST00000498614 STUMQ69YW2 141 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms