RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 RMI2Q96E14 147 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GALNT14Q96FL9 552 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 REEP6Q96HR9 211 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR7D2Q96RA2 312 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR52E6Q96RD3 313 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PEBP4Q96S96 227 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 IMMP2LQ96T52 175 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MGLLQ99685 303 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TBL1YQ9BQ87 522 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MRPL57Q9BQC6 102 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 C20orf144Q9BQM9 153 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NUDT9Q9BW91 350 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GGTLC1Q9BX51 225 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PARD6GQ9BYG4 376 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 PARP12Q9H0J9 701 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 RAB1BQ9H0U4 201 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 BANF2Q9H503 90 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 RERGLQ9H628 205 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LYRM4Q9HD34 91 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 HRASLSQ9HDD0 168 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 EXOSC4Q9NPD3 245 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 UQCC1Q9NVA1 299 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CLN6Q9NWW5 311 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NDUFB11Q9NX14 153 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 BET1LQ9NYM9 111 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TAS2R8Q9NYW2 309 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 COMMD3Q9UBI1 195 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 DHCR7Q9UBM7 475 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 VPS29Q9UBQ0 182 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 VAX2Q9UIW0 290 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 YARS2Q9Y2Z4 477 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 PARP14Q460N5 1801 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NUP214P35658 2090 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LOXHD1Q8IVV2 1947 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 BAZ2AQ9UIF9 1905 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 PI4KAP42356 2102 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 KIAA1671Q9BY89 1806 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FXYD6-FXYD2A0A087WZ82 144 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 BORCS7-ASMTA0A0B4J1R7 106 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TRAV25A0A0B4J276 109 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 KBTBD11-OT1A0A1B0GTJ5 212 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TSPAN11A1L157 253 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MEIS3P1A6NDR6 274 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ARRDC5A6NEK1 342 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OR5H14A6NHG9 310 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 IFITM5A6NNB3 132 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 C9J4A7 227 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 F5H5T6 163 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 H0YJW9 148 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 H3BN98 237 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GPR31O00270 319 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 PLA2G10O15496 165 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FGF16O43320 207 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ZNF207O43670 478 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 PDE6DO43924 150 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ADAP1O75689 374 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GLSO94925 669 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 UBL3O95164 117 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 RCBTB2O95199 551 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MPZL1O95297 269 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CYB5R3P00387 301 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 HPRT1P00492 218 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CFDP00746 253 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 IFNA5P01569 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 IL3P08700 152 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 HTR1AP08908 422 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 PGA5P0DJD9 388 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CT45A6P0DMU7 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CT45A5P0DMU8 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CT45A7P0DMV0 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 PPIBP23284 216 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 CXCR1P25024 350 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GABRR2P28476 465 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 BRS3P32247 399 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SULT1A2P50226 295 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 DAOAP59103 153 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TAS2R43P59537 309 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 ERVS71-1P61550 626 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 LSM6P62312 80 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 TBPL1P62380 186 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SLC35A1P78382 337 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CRADDP78560 199 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 FABP5Q01469 135 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 MEF2BQ02080 365 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 SSBP1Q04837 148 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 SRSF6Q13247 344 aaKnown RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 SKP2Q13309 424 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 HTR4Q13639 388 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 SURF2Q15527 256 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 IGFBP7Q16270 282 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 C18orf21Q32NC0 220 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 CEACAM21Q3KPI0 293 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 TMEM176BQ3YBM2 270 aaPredicted RBP1.48□□□□□ -2.17
CBX3-208ENST00000497498 HIKESHIQ53FT3 197 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 OCIAD2Q56VL3 154 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 CT45A1Q5HYN5 189 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GCSAMLQ5JQS6 135 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 BCL2L15Q5TBC7 163 aa1.48□□□□□ -2.17
CBX3-208ENST00000497498 GLT8D1Q68CQ7 371 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms