RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF823P16415 610 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 HOXC5Q00444 222 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 GNA12Q03113 381 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 CST6Q15828 149 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 C12orf45Q8N5I9 185 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-224ENST00000497488 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 SGMS2Q8NHU3 365 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF721Q8TF20 911 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 ITLN2Q8WWU7 325 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-224ENST00000497488 LZICQ8WZA0 190 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 ELSPBP1Q96BH3 223 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 GPR82Q96P67 336 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 NMNAT3Q96T66 252 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 B9D2Q9BPU9 175 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 RSPO3Q9BXY4 272 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-224ENST00000497488 AK3Q9UIJ7 227 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 BDP1A6H8Y1 2624 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 IGHV1-3A0A0C4DH29 117 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 LINC00862A6NCI5 91 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 OR5H14A6NHG9 310 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 IGLV1-47P01700 117 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF883P0CG24 379 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 RPS10P46783 165 aaKnown RBP4.07□□□□□ -1.76
BRCA1-224ENST00000497488 SRP9P49458 86 aaKnown RBP4.07□□□□□ -1.76
BRCA1-224ENST00000497488 FGF12P61328 243 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 GRK1Q15835 563 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 TNFAIP8L3Q5GJ75 292 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 FAM104BQ5XKR9 115 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 ZFP1Q6P2D0 407 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 OR13C8Q8NGS7 320 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 STARD4Q96DR4 205 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 ERMAPQ96PL5 475 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-224ENST00000497488 PEBP4Q96S96 227 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 EFCAB11Q9BUY7 163 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 PLA2G12AQ9BZM1 189 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 TMEM138Q9NPI0 162 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 TMEM14AQ9Y6G1 99 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 PTPRDP23468 1912 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 OBSL1O75147 1896 aa4.07□□□□□ -1.76
BRCA1-224ENST00000497488 CUL9Q8IWT3 2517 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 E7EQ34 232 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 NDUFA2O43678 99 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 GYPCP04921 128 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 TFPTP0C1Z6 253 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 OR5AC1P0C628 307 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 PPP1CCP36873 323 aaKnown RBP4.06□□□□□ -1.76
BRCA1-224ENST00000497488 OPRK1P41145 380 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 CDC42P60953 191 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 BSPH1Q075Z2 132 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 PSG7Q13046 419 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 KLHL12Q53G59 568 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 Q6ZS49 121 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 SGPP2Q8IWX5 399 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF283Q8N7M2 679 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF615Q8N8J6 731 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 OR5J2Q8NH18 312 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 LINC01560Q8TB33 94 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 GPR119Q8TDV5 335 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 RAB2BQ8WUD1 216 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 SLC25A46Q96AG3 418 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 LYSMD1Q96S90 227 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 SERPINI1Q99574 410 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 TMEM70Q9BUB7 260 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 CCDC90BQ9GZT6 254 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 CHST6Q9GZX3 395 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 FAM60AQ9NP50 221 aa4.06□□□□□ -1.76
BRCA1-224ENST00000497488 KIF26AQ9ULI4 1882 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-224ENST00000497488 GREB1Q4ZG55 1949 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 TICRRQ7Z2Z1 1910 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 NUP210Q8TEM1 1887 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-224ENST00000497488 PATJQ8NI35 1801 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 IGHV3-21A0A0B4J1V1 117 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 FAM92AA1XBS5 289 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 AIPO00170 330 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 SLC17A3O00476 420 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 CD7P09564 240 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 PPIBP23284 216 aaKnown RBP4.05□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF140P52738 457 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-224ENST00000497488 DEFA3P59666 94 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 GLT8D1Q68CQ7 371 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 Q6ZS52 159 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF101Q8IZC7 436 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF561Q8N587 486 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 MAPK1IP1LQ8NDC0 245 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 IGF2BP2-AS1Q96M15 143 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 CGREF1Q99674 301 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 C1orf50Q9BV19 199 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 C20orf27Q9GZN8 174 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 PDFQ9HBH1 243 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 TNFRSF19Q9NS68 423 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF355PQ9NSJ1 428 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 FBXL12Q9NXK8 326 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 JPT1Q9UK76 154 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 MYO10Q9HD67 2058 aa4.05□□□□□ -1.76
BRCA1-224ENST00000497488 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF318Q5VUA4 2279 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 A0A0J9YY10 115 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms