RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 TNFRSF13BO14836 293 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 ST8SIA3O43173 380 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 TGFAP01135 160 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CTSDP07339 412 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CTXN2P0C2S0 81 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 NBEAP1P0C6P0 100 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 TFPI2P48307 235 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 FGF8P55075 233 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF121P58317 390 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 GRB2P62993 217 aaKnown RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SCGB2A2Q13296 93 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR8B8Q15620 311 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SPATA45Q537H7 98 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 WDR38Q5JTN6 314 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 FAM201AQ5SY85 155 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 PRAMEF6Q5VXH4 476 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 KCTD18Q6PI47 426 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SPSB3Q6PJ21 355 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 Q6ZN92 141 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 MRPL21Q7Z2W9 205 aaKnown RBP4.01□□□□□ -1.77
CSMD3-208ENST00000497026 LHFPL4Q7Z7J7 247 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 WDR86Q86TI4 376 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CATSPERDQ86XM0 798 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CMTM1Q8IZ96 169 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 PNKDQ8N490 385 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR5D18Q8NGL1 313 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR4D5Q8NGN0 318 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR13G1Q8NGZ3 307 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR2T10Q8NGZ9 312 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 ERGIC1Q969X5 290 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SH3BGRL3Q9H299 93 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 CST9LQ9H4G1 147 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF665Q9H7R5 613 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 SLC2A9Q9NRM0 540 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 EHFQ9NZC4 300 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 OR6C3Q9NZP0 311 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 KCNS2Q9ULS6 477 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 HSF4Q9ULV5 492 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 HHLA2Q9UM44 414 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 PPP1R3CQ9UQK1 317 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 LAMTOR2Q9Y2Q5 125 aa4.01□□□□□ -1.77
CSMD3-208ENST00000497026 LOC105371242A0A075B767 164 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 PIGBOS1A0A0B4J2F0 54 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 DUXBA0A1W2PPF3 345 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 CRYM-AS1A6NIL9 109 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 OR5B21A6NL26 309 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 B4DSR2 109 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM178BH3BS89 294 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 CDIPTO14735 213 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 XRCC2O43543 280 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 SRSF10O75494 262 aaKnown RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 KBTBD11O94819 623 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 IGLV3-1P01715 115 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 MSMBP08118 114 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 H2BFMP0C1H6 154 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 MMP9P14780 707 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 IGFBP3P17936 291 aaPredicted RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 CA6P23280 308 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 ATP6V0CP27449 155 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 CDC34P49427 236 aaPredicted RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 SUPT4H1P63272 117 aaKnown RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 EWSR1Q01844 656 aaKnown RBP eCLIP4□□□□□ -1.77
CSMD3-208ENST00000497026 ARFRP1Q13795 201 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 PSG3Q16557 428 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 BSXQ3C1V8 233 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 LDLRAD2Q5SZI1 272 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 FAM120AOSQ5T036 256 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 TPTE2P1Q5T6R2 138 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 ASPHD1Q5U4P2 390 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 SAMD13Q5VXD3 122 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 TCF24Q7RTU0 167 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 LHFPL1Q86WI0 220 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 NIT1Q86X76 327 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 LYG1Q8N1E2 194 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF709Q8N972 641 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 CCDC71LQ8N9Z2 235 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 CSNK2A3Q8NEV1 391 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 OR5AU1Q8NGC0 362 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 OR8B12Q8NGG6 310 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF596Q8TC21 504 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 DYRK2Q92630 601 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 RAB1CQ92928 201 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 IL22RA2Q969J5 263 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 REEP6Q96HR9 211 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 SMIM7Q9BQ49 75 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 SAMD10Q9BYL1 202 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 FGF23Q9GZV9 251 aaPredicted RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 G6PC2Q9NQR9 355 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 FAM206AQ9NX38 181 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 MRPL27Q9P0M9 148 aaKnown RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 GNG13Q9P2W3 67 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 RCL1Q9Y2P8 373 aaKnown RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 MRPS16Q9Y3D3 137 aaKnown RBP4□□□□□ -1.77
CSMD3-208ENST00000497026 TRAPPC1Q9Y5R8 145 aa4□□□□□ -1.77
CSMD3-208ENST00000497026 DOCK11Q5JSL3 2073 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
CSMD3-208ENST00000497026 LOC107986453A0A1B0GWG9 222 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms