RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 OR1A1Q9P1Q5 309 aa5.09□□□□□ -1.59
SSBP1-213ENST00000496622 TRAV14DV4A0A0A6YYC5 116 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 DPRXA6NFQ7 191 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A27PA6NNH2 459 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 FAM157AC9JC47 383 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 THBDP07204 575 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 CRYGBP07316 175 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 UQCRFS1P47985 274 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 TAS2R46P59540 309 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF718Q3SXZ3 478 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 FGFRL1Q8N441 504 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 ZNRF1Q8ND25 227 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 OCC1Q8TAD7 63 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 LINC01560Q8TB33 94 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM18Q96B42 140 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 SDSLQ96GA7 329 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 PBDC1Q9BVG4 233 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 SFXN3Q9BWM7 321 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 C1orf123Q9NWV4 160 aa5.09□□□□□ -1.6
SSBP1-213ENST00000496622 FN1P02751 2386 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 A0A1W2PRE2 83 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF785A8K8V0 405 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 PPP5D1E7EU14 171 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 C16orf97H3BN30 126 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 J3QT63 122 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ENSAO43768 121 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 NXPH3O95157 252 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 NAPSAO96009 420 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ADH4P08319 380 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 CD40P25942 277 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 GLRXP35754 106 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 BSPH1Q075Z2 132 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 EDDM3AQ14507 147 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ELOBQ15370 118 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM183BQ1AE95 376 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 IZUMO4Q1ZYL8 232 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 MST1LQ2TV78 715 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 CD300EQ496F6 205 aaPredicted RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 Q6P435 159 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 KIR2DL5BQ8NHK3 375 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 MRPL30Q8TCC3 161 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ENY2Q9NPA8 101 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 LRP5LA4QPB2 252 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 DEFB108AA8MXU0 73 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 H3BQ15 152 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 J3QLI3 93 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 DUS4LO95620 317 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 PLAUP00749 431 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 PPYP01298 95 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 TYMSP04818 313 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 GLIPR1P48060 266 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 HNRNPA3P51991 378 aaKnown RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 RUNX1Q01196 453 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 FOXL1Q12952 345 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF818PQ6ZRF7 136 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 LYZL2Q7Z4W2 148 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 CENPVQ7Z7K6 275 aaPredicted RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ZDHHC22Q8N966 263 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 OR10G4Q8NGN3 311 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 MRAPQ8TCY5 172 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 RTN4IP1Q8WWV3 396 aaPredicted RBP5.08□□□□□ -1.6
SSBP1-213ENST00000496622 DCUN1D4Q92564 292 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 UHRF2Q96PU4 802 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF286AQ9HBT8 521 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 CCL28Q9NRJ3 127 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 TRAPPC2LQ9UL33 140 aa5.08□□□□□ -1.6
SSBP1-213ENST00000496622 IGHV3-43A0A0B4J1X8 118 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 OR2T8A6NH00 312 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 H0YIZ8 118 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF561-AS1K7EIQ3 104 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 BCL2L11O43521 198 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF728P0DKX0 622 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 IGHV3-43DP0DP04 118 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 CNN1P51911 297 aaKnown RBP5.07□□□□□ -1.6
SSBP1-213ENST00000496622 C3orf36Q3SXR2 165 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 PCSK4Q6UW60 755 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 NEGR1Q7Z3B1 354 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 GAPTQ8N292 157 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 OR1L4Q8NGR5 311 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF418Q8TF45 676 aaPredicted RBP5.07□□□□□ -1.6
SSBP1-213ENST00000496622 LRRC29Q8WV35 223 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ITLN1Q8WWA0 313 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 RND1Q92730 232 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 BTF3L4Q96K17 158 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 VAMP8Q9BV40 100 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 CTDSP1Q9GZU7 261 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 TAAR3PQ9P1P4 343 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 FBXL7Q9UJT9 491 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 MEMO1Q9Y316 297 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 WSB1Q9Y6I7 421 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 MSGN1A6NI15 193 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 CCL21O00585 134 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 FOXH1O75593 365 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 SFT2D2O95562 160 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 RPS16P62249 146 aaKnown RBP5.07□□□□□ -1.6
SSBP1-213ENST00000496622 Q6ZN92 141 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 GCSAMQ8N6F7 178 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms