RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 TCL1AP56279 114 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 TMPRSS3P57727 454 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 PMS2P11Q13670 270 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 RAB1CQ92928 201 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 A0A1W2PRD5 423 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 A0A1W2PRF3 423 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 A0A1W2PRM7 423 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 SHISA9B4DS77 424 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 PHOX2AO14813 284 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 RNASE2P10153 161 aaKnown RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 NBL1P41271 181 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 WT1-ASQ06250 92 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 PRR31Q5SQ13 230 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 TGIF2LXQ8IUE1 241 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 NPIPB3Q92617 1050 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 LINC00479Q96M42 142 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 TRAPPC1Q9Y5R8 145 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 SPG11Q96JI7 2443 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 VSTM5A8MXK1 200 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 K7EN84 100 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 OR5G3P0C626 314 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 PYYP10082 97 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 MGST1P10620 155 aaKnown RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 LOXP28300 417 aaPredicted RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 RPL29P47914 159 aaKnown RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 ERHP84090 104 aaKnown RBP9.35□□□□□ -0.91
CDCA7-208ENST00000496441 RUSC1-AS1Q66K80 236 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 CORO2AQ92828 525 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 MISP3Q96FF7 219 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
CDCA7-208ENST00000496441 H3BTX0 84 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 VENTXO95231 258 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 MOSP00540 346 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 CBLN1P23435 193 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 NUBP1P53384 320 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PRR20EP86478 221 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PRR20CP86479 221 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PRR20DP86480 221 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PRR20BP86481 221 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PRR20AP86496 221 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 ZNF833PQ6ZTB9 187 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 OR1P1Q8NH06 330 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
CDCA7-208ENST00000496441 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
CDCA7-208ENST00000496441 SLC45A2Q9UMX9 530 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 ITGB1BP1O14713 200 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 IGHV2-70P01814 119 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 CD33P20138 364 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 CD24P25063 80 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 FAM209BQ5JX69 171 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 TMEM144Q7Z5S9 345 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
CDCA7-208ENST00000496441 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 OR4C13Q8NGP0 309 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 GSX1Q9H4S2 264 aaPredicted RBP9.34□□□□□ -0.91
CDCA7-208ENST00000496441 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
CDCA7-208ENST00000496441 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
CDCA7-208ENST00000496441 MT-CO2P00403 227 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 AMBPP02760 352 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 ORM2P19652 201 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 S100A12P80511 92 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 CDSNQ15517 529 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 TNXAQ16473 311 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
CDCA7-208ENST00000496441 CENPWQ5EE01 88 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 OSR1Q8TAX0 266 aaPredicted RBP9.33□□□□□ -0.92
CDCA7-208ENST00000496441 SLC35E1Q96K37 410 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 BET1LQ9NYM9 111 aa9.33□□□□□ -0.92
CDCA7-208ENST00000496441 HELTA6NFD8 242 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
CDCA7-208ENST00000496441 CD3EP07766 207 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 CD69Q07108 199 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 OR5AN1Q8NGI8 311 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 ZNF257Q9Y2Q1 563 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 ITPR1Q14643 2758 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 IGHV1-8P0DP01 117 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 GNG4P50150 75 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
CDCA7-208ENST00000496441 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
CDCA7-208ENST00000496441 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
CDCA7-208ENST00000496441 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
CDCA7-208ENST00000496441 NGBQ9NPG2 151 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms