RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	COL4A1	P02462	1669 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	SORL1	Q92673	2214 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	CENPF	P49454	3210 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	MDN1	Q9NU22	5596 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	MUC5AC	P98088	5654 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TRAV26-2	A0A0B4J265	109 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204		A0A0G2JQZ4	141 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FAM236D	A0A1B0GTK5	79 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	OR4C46	A6NHA9	309 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FNDC10	F2Z333	226 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FAAH	O00519	579 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	S1PR2	O95136	353 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	MSMB	P08118	114 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	CST2	P09228	141 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TFPT	P0C1Z6	253 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	ZNF705D	P0CH99	300 aa	Predicted RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FAM236C	P0DP71	79 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	CYBA	P13498	195 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	S100A7	P31151	101 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	G6PC	P35575	357 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	RPL28	P46779	137 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	EMP1	P54849	157 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	RPS20	P60866	119 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	RAB14	P61106	215 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	HIST1H4A	P62805	103 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	KCNJ8	Q15842	424 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TMEM42	Q69YG0	159 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	LYZL1	Q6UWQ5	148 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	SLC35E3	Q7Z769	313 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	OR6V1	Q8N148	313 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	OR51T1	Q8NGJ9	327 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	BORCS7	Q96B45	105 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	MRPS24	Q96EL2	167 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	IMMP2L	Q96T52	175 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	CMSS1	Q9BQ75	279 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TXNDC17	Q9BRA2	123 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TRIM4	Q9C037	500 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	NDUFB11	Q9NX14	153 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FBXL12	Q9NXK8	326 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TP73-AS1	Q9UF72	201 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	FBXO5	Q9UKT4	447 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	PRELID3B	Q9Y3B1	194 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	TMEM56-RWDD3	S4R434	201 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	SCAF11	Q99590	1463 aa	Known RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	BRCA2	P51587	3418 aa		0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.97	□□□□□ -2.25
RAD50-208	ENST00000496204	ZFYVE26	Q68DK2	2539 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	USP9Y	O00507	2555 aa	Predicted RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	IGLV3-9	A0A075B6K5	115 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	IGHV3-64	A0A075B6Q5	118 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TRAV7	A0A075B6U4	112 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TMSB15B	A0A087X1C1	80 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TRAV41	A0A0B4J266	112 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	hADV38S2	A0JD32	116 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204		H3BRN7	92 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204		H3BT86	120 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204		J3QKU1	62 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	KLRC4	O43908	158 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	NOS1AP	O75052	506 aa	Predicted RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	IGHV3-7	P01780	117 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	PRM2	P04554	102 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	HLA-DMB	P28068	263 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	EVX1	P49640	407 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	ARF6	P62330	175 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	CDK10	Q15131	360 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	ZNF791	Q3KP31	576 aa	Predicted RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	KRTAP21-3	Q3LHN1	58 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204		Q6ZTI0	123 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	ANKRD29	Q8N6D5	301 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	ZNF676	Q8N7Q3	588 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	OR52L1	Q8NGH7	329 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	OR13C4	Q8NGS5	318 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	SPACA4	Q8TDM5	124 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	KLF6	Q99612	283 aa	Predicted RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	NIPSNAP1	Q9BPW8	284 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	DERL1	Q9BUN8	251 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TMEM147	Q9BVK8	224 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TIMM21	Q9BVV7	248 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TTTY12	Q9BZ98	90 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	C20orf27	Q9GZN8	174 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	COMMD5	Q9GZQ3	224 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TMEM106B	Q9NUM4	274 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	DOK5	Q9P104	306 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	TIMM22	Q9Y584	194 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	PDE4DIP	Q5VU43	2346 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	CEP164	Q9UPV0	1460 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	FBN2	P35556	2912 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	RTL1	A6NKG5	1358 aa		0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	EIF3A	Q14152	1382 aa	Known RBP	0.96	□□□□□ -2.26
RAD50-208	ENST00000496204	PRRC2B	Q5JSZ5	2229 aa	Known RBP	0.95	□□□□□ -2.26
RAD50-208	ENST00000496204	CHD3	Q12873	2000 aa	Known RBP	0.95	□□□□□ -2.26
RAD50-208	ENST00000496204	TRAV38-1	A0A0B4J264	116 aa		0.95	□□□□□ -2.26
RAD50-208	ENST00000496204	IGHV1-18	A0A0C4DH31	117 aa		0.95	□□□□□ -2.26
RAD50-208	ENST00000496204	EXOC1L	A0A1B0GW35	172 aa		0.95	□□□□□ -2.26
RAD50-208	ENST00000496204	IRGM	A1A4Y4	181 aa		0.95	□□□□□ -2.26

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