RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 MBP02144 154 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 GPX4P36969 197 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-208ENST00000496081 OPRK1P41145 380 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 FXYD3Q14802 87 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 C19orf35Q6ZS72 473 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 LFNGQ8NES3 379 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 MBD3L1Q8WWY6 194 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 MBD6Q96DN6 1003 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.33
HLA-A-208ENST00000496081 FNDC4Q9H6D8 234 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-208ENST00000496081 IGKV1OR2-108A0A075B7D4 117 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 BTBD17A6NE02 478 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 CD5P06127 495 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 SLC16A13Q7RTY0 426 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 OR10G4Q8NGN3 311 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 OR10G9Q8NGN4 311 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 OR10G7Q8NGN6 311 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
HLA-A-208ENST00000496081 TREM1Q9NP99 234 aa13.01□□□□□ -0.33
HLA-A-208ENST00000496081 A0A0U1RQK1 487 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 TMEM218A2RU14 115 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 HBE1P02100 147 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 M6PRP20645 277 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 CX3CL1P78423 397 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 MIC13Q5XKP0 118 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 LCN15Q6UWW0 184 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 ZNF562Q6V9R5 426 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 Q8N9W7 124 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 OR1P1Q8NH06 330 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 F11RQ9Y624 299 aaKnown RBP13□□□□□ -0.33
HLA-A-208ENST00000496081 PXMP4Q9Y6I8 212 aa13□□□□□ -0.33
HLA-A-208ENST00000496081 SOX15O60248 233 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 YIF1AO95070 293 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 GUK1Q16774 197 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 KRTAP1-3Q8IUG1 177 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 FAM103A1Q9BTL3 118 aaKnown RBP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 MEGF9Q9H1U4 602 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 C1RLQ9NZP8 487 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 C9JQL5 133 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 EIF3GO75821 320 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 RAB31Q13636 194 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 ABHD5Q8WTS1 349 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 DMRT1Q9Y5R6 373 aa12.99□□□□□ -0.33
HLA-A-208ENST00000496081 SOX21Q9Y651 276 aaPredicted RBP12.99□□□□□ -0.33
HLA-A-208ENST00000496081 CR1P17927 2039 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 DEFA4P12838 97 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 FGF8P55075 233 aaPredicted RBP12.98□□□□□ -0.33
HLA-A-208ENST00000496081 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 PRSS57Q6UWY2 283 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 ACY3Q96HD9 319 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 EIF5A2Q9GZV4 153 aaKnown RBP12.98□□□□□ -0.33
HLA-A-208ENST00000496081 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 KCNIP2Q9NS61 270 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 SLC45A2Q9UMX9 530 aa12.98□□□□□ -0.33
HLA-A-208ENST00000496081 ABCA1O95477 2261 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CYB5BO43169 146 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 TGFAP01135 160 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CRYGCP07315 174 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CTRB1P17538 263 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 B2MP61769 119 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PRR20EP86478 221 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PRR20CP86479 221 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PRR20DP86480 221 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PRR20BP86481 221 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PRR20AP86496 221 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 NDPQ00604 133 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 Q96MF0 132 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
HLA-A-208ENST00000496081 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 WNT10AQ9GZT5 417 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 MRPL36Q9P0J6 103 aaKnown RBP12.97□□□□□ -0.33
HLA-A-208ENST00000496081 IGHV7-81A0A0B4J1V7 117 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 CORTO00230 105 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 LINC00869P0C866 280 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 IGHV4-31P0DP07 118 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 ADCYAP1P18509 176 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 OR10J1P30954 320 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 PEA15Q15121 130 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 NPIPB3Q92617 1050 aa12.97□□□□□ -0.33
HLA-A-208ENST00000496081 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms