RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 STX12Q86Y82 276 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 CLVS1Q8IUQ0 354 aaPredicted RBP3.14□□□□□ -1.91
VPS52-222ENST00000495981 TCTEX1D1Q8N7M0 179 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 OR4K15Q8NH41 348 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 GPER1Q99527 375 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 NIPSNAP3BQ9BS92 247 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 FAM103A1Q9BTL3 118 aaKnown RBP3.14□□□□□ -1.91
VPS52-222ENST00000495981 CST11Q9H112 138 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 VCXQ9H320 206 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 TAF9BQ9HBM6 251 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 CACNG5Q9UF02 275 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 LRRC42Q9Y546 428 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 AP4S1Q9Y587 144 aa3.14□□□□□ -1.91
VPS52-222ENST00000495981 IZUMO1RA6ND01 250 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 OR5H14A6NHG9 310 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 H3BMQ9 156 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 FCN1O00602 326 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RS1O15537 224 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 ZNF780AO75290 641 aaPredicted RBP3.13□□□□□ -1.91
VPS52-222ENST00000495981 PDCD6O75340 191 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 CA11O75493 328 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 GPX5O75715 221 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 NAPSAO96009 420 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 CA2P00918 260 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 IGHV3-11P01762 117 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 MAS1P04201 325 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 IGKV1-16P04430 117 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 CD2P06729 351 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 GTF2F2P13984 249 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 MGMTP16455 207 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 MFAP2P55001 183 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 TPPP2P59282 170 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RAB14P61106 215 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 TSPAN5P62079 268 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 UNC119Q13432 240 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 MRGPRG-AS1Q2M3A8 158 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 ZNF876PQ49A33 203 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 CCDC58Q4VC31 144 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RPL39P5Q59GN2 51 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 ATAD3CQ5T2N8 411 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RNASEKQ6P5S7 137 aaKnown RBP3.13□□□□□ -1.91
VPS52-222ENST00000495981 ZNF880Q6PDB4 577 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 CBR4Q8N4T8 237 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 DHRSXQ8N5I4 330 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 C15orf54Q8N8G6 183 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 ZFP41Q8N8Y5 198 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 OR1L6Q8NGR2 347 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RHOXF1Q8NHV9 184 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 NEK7Q8TDX7 302 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 PYDC1Q8WXC3 89 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 MRPS24Q96EL2 167 aaKnown RBP3.13□□□□□ -1.91
VPS52-222ENST00000495981 DERL3Q96Q80 235 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 SULT4A1Q9BR01 284 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 C6orf62Q9GZU0 229 aaPredicted RBP3.13□□□□□ -1.91
VPS52-222ENST00000495981 METTL9Q9H1A3 318 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 WFDC10AQ9H1F0 79 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 FBXL15Q9H469 300 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 BANF2Q9H503 90 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 SPACA1Q9HBV2 294 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 AMBNQ9NP70 447 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 FGF20Q9NP95 211 aaPredicted RBP3.13□□□□□ -1.91
VPS52-222ENST00000495981 OR2S2Q9NQN1 319 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 RHBDL2Q9NX52 303 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 OR1A1Q9P1Q5 309 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 TRAPPC2LQ9UL33 140 aa3.13□□□□□ -1.91
VPS52-222ENST00000495981 TNCP24821 2201 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 IGKV1-6A0A0C4DH72 117 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 TEX48A0A1B0GUV7 120 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 FOXI3A8MTJ6 420 aaPredicted RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 ANKRD65E5RJM6 399 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 H3BUA1 57 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 YPEL1O60688 119 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 BRI3O95415 125 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 ATP6V1G2O95670 118 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 FADS2O95864 444 aaKnown RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 IGLV2-23P01705 113 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 HSPB1P04792 205 aaKnown RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 GLAP06280 429 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 STAG3L3P0CL85 134 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 CT45A6P0DMU7 189 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 CT45A5P0DMU8 189 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 CT45A7P0DMV0 189 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 PLP1P60201 277 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 SRPXP78539 464 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 QRFPP83859 136 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 COTL1Q14019 142 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 INSL4Q14641 139 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 MOGAT2Q3SYC2 334 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 Q499Y3 187 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 ACTBL2Q562R1 376 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 YIF1BQ5BJH7 314 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 SPANXN2Q5MJ10 180 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 ZNF660Q6AZW8 331 aaPredicted RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 LAIR2Q6ISS4 152 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 RPL22L1Q6P5R6 122 aaKnown RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 REG3GQ6UW15 175 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 GLIPR1L1Q6UWM5 242 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 MOB1BQ7L9L4 216 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 CEACAM19Q7Z692 300 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 SGPP2Q8IWX5 399 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms