RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 LMX1AQ8TE12 382 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 SLC37A2Q8TED4 501 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 C16orf78Q8WTQ4 265 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 ABHD14BQ96IU4 210 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 AIF1LQ9BQI0 150 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 MROQ9BYG7 248 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 MED28Q9H204 178 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 SLC35A3Q9Y2D2 325 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 NCKAP5O14513 1909 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 CEP290O15078 2479 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 IGSF23A1L1A6 192 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 EVPLLA8MZ36 301 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR11H12B2RN74 326 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 G3V3Q6 166 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 GPR31O00270 319 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 TP53I11O14683 189 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 STK16O75716 305 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 HAND1O96004 215 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 IGLV3-27P01718 113 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 APOC1P02654 83 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 CTSGP08311 255 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR4A8P0C604 315 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 IGHV3-30-3P0DP02 117 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 CCL5P13501 91 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 S100A7P31151 101 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 CCR7P32248 378 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OPRM1P35372 400 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 HSPA9P38646 679 aaKnown RBP2.74□□□□□ -1.97
CCDC39-207ENST00000495817 FGF12P61328 243 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 GNG3P63215 75 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 DEFA6Q01524 100 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 IFITM2Q01629 132 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 LIN52Q52LA3 116 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 MESTQ5EB52 335 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 ACSBG2Q5FVE4 666 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 C1orf195Q5TG92 126 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 DEFB123Q8N688 67 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 ST6GALNAC3Q8NDV1 305 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR11H1Q8NG94 326 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR10D4PQ8NGN7 298 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR11H2Q8NH07 326 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 MFSD8Q8NHS3 518 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 GPR119Q8TDV5 335 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 ASB17Q8WXJ9 295 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 ASB13Q8WXK3 278 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 TBX5Q99593 518 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 SIGMAR1Q99720 223 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 C1QTNF6Q9BXI9 259 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 MIXL1Q9H2W2 232 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 BOLA2Q9H3K6 86 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 TMEM138Q9NPI0 162 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 MRPL16Q9NX20 251 aaKnown RBP2.74□□□□□ -1.97
CCDC39-207ENST00000495817 DKKL1Q9UK85 242 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 DNAJC12Q9UKB3 198 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 OR52A1Q9UKL2 312 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 NUBP2Q9Y5Y2 271 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 KIAA0100Q14667 2235 aaKnown RBP2.74□□□□□ -1.97
CCDC39-207ENST00000495817 PHIPQ8WWQ0 1821 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 REV3LO60673 3130 aa2.74□□□□□ -1.97
CCDC39-207ENST00000495817 DDX60LQ5H9U9 1706 aaKnown RBP2.73□□□□□ -1.97
CCDC39-207ENST00000495817 DOCK3Q8IZD9 2030 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 DOCK6Q96HP0 2047 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 DNAH12Q6ZR08 3092 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 MYH11P35749 1972 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 LINC00862A6NCI5 91 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 FAM159BA6NKW6 160 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 F8W036 122 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 KPNA4O00629 521 aaPredicted RBP2.73□□□□□ -1.97
CCDC39-207ENST00000495817 SMIM24O75264 130 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 FAM228BP0C875 321 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 ESDP10768 282 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 REG1BP48304 166 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 SRP9P49458 86 aaKnown RBP2.73□□□□□ -1.97
CCDC39-207ENST00000495817 GZMMP51124 257 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 SLC35A2P78381 396 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 BTN3A2P78410 334 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 RUNX1Q01196 453 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 TMEM97Q5BJF2 176 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 LCN8Q6JVE9 175 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 GLT6D1Q7Z4J2 308 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 STX19Q8N4C7 294 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 TMEM86BQ8N661 226 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 OR8J3Q8NGG0 315 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 OR10D3Q8NH80 312 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 PFDN5Q99471 154 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 SS18L2Q9UHA2 77 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 UFC1Q9Y3C8 167 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 FAM32AQ9Y421 112 aaKnown RBP2.73□□□□□ -1.97
CCDC39-207ENST00000495817 MAST2Q6P0Q8 1798 aa2.73□□□□□ -1.97
CCDC39-207ENST00000495817 IFNA1P01562 189 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 ATP5G1P05496 136 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 LINC00313P59037 77 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 PSG4Q00888 419 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 EDDM3AQ14507 147 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 TSNQ15631 228 aaKnown RBP2.72□□□□□ -1.97
CCDC39-207ENST00000495817 MRPL51Q4U2R6 128 aaKnown RBP2.72□□□□□ -1.97
CCDC39-207ENST00000495817 OR10K2Q6IF99 312 aa2.72□□□□□ -1.97
CCDC39-207ENST00000495817 RASSF6Q6ZTQ3 369 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms